Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09]
434 sequences; 31,475,124 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq416 116 3e-21
>seq416
Length=196129
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || ||||| || |||||| |||| || || || || ||| | ||
Sbjct 78216 CATGCAAATCTTCGTCAAGACTCTCACAGGCAAGACTATCACACTCGAGGTCGAATCATC 78157
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || ||||||||||| || || || ||||| || ||
Sbjct 78156 GGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCA 78097
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || | || ||| | |||| | || || |||||
Sbjct 78096 ACAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCAGGACCTTGTCGGACTACAA 78037
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || ||||||||||| | || |||| | ||| | || ||||||
Sbjct 78036 CATCCAGAAGGAGTCGACTCTTCACCTGGTGCTCCGTCTTCGCGGTGGC 77988
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| |||| || || || ||||| | |||
Sbjct 78443 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCC 78384
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || ||||| || ||||| || || || ||
Sbjct 78383 GACACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 78324
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||||| ||| | || ||| || || | || ||||||
Sbjct 78323 CAGCGTCTGATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACTCTCAGTGACTACAAC 78264
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || | || | ||| | || ||||||||
Sbjct 78263 ATCCAAAAGGAGTCCACGCTCCACCTCGTCCTTCGTCTTCGCGGTGGCAT 78214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916040567680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |