Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq152 100 3e-16 >seq152 Length=48256 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || || || ||||| | ||||| || ||||| ||||||||| | |||||||| || ||| Sbjct 27172 CGCGAAGAAGGCGATCTCGGCCCCGTGTACGGCTTCCAGTGGCGCCACTTTGGCGCAGAG 27231 Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG-CAGTACGTGAT 34503 || | || || | || ||||| ||||| ||||| | ||||| ||| | | | || | Sbjct 27232 TACCAGGACCGCCACGCAGACTACTCGGGCCAGGGCGTCGACCAACTGGCCGAAGTTGTT 27291 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || | || ||| | |||||| | ||| | || ||| | || ||||||||||||| Sbjct 27292 CGCAAGCTCAAAGAG-AACCCTTACGACCGCAGAATCATTCTGAGCGCGTGGAACCCTGC 27350 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 |||||| ||||| | || || ||||||| || ||||||||||| Sbjct 27351 CGATCTCAAGAAAATGGCTTTGCCTCCTTGCCACATGTTCGCTCAATTCTACGT 27404 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 ||||||||||| || ||||||| || || | ||||| |||||| ||| Sbjct 27404 ACGTAGAATTGAGCGAACATGTGGCAAGGAGGCAAAGCCATTTTCTTGAGATCGGCAGGG 27345 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||||| || | ||| || | ||| | |||||| | ||| || | ||| || Sbjct 27344 TTCCACGCGCTCAGAATGATTCTGCGGTCGTAAGGGTT-CTCTTTGAGCTTGCGAACAAC 27286 Query 6848 TACTG-CAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGC 6906 | | | ||| ||||| | ||||| ||||| ||||| || | || || | ||||| || Sbjct 27285 TTCGGCCAGTTGGTCGACGCCCTGGCCCGAGTAGTCTGCGTGGCGGTCCTGGTACTCTGC 27226 Query 6907 CCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 |||||||| | ||||||||| ||||| || ||||| | ||||| || || || Sbjct 27225 GCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCTTCTTCGCG 27172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259968176480