Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq416 156 1e-32 seq104 120 7e-22 seq57 100 7e-16 seq98 86.0 1e-11 >seq416 Length=196129 Score = 156 bits (172), Expect = 1e-32 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || ||||| ||||| || || || |||| ||||| || | ||| || Sbjct 77995 CGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTC 78054 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || || || |||||||| |||||||||||||| || |||||||| || || ||||| Sbjct 78055 CTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCC 78114 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| ||| || ||||||||||| || | ||| || || | Sbjct 78115 TCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGT 78174 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| || | ||| | |||||| Sbjct 78175 GTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 >seq104 Length=125481 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | || || || |||||||| || |||||||| Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || |||||||| || ||||| || |||||||| |||||||| ||||||| ||| Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 107560 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| |||| || || || | ||||| ||||||||||||| || || | ||| Sbjct 107559 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 107501 >seq57 Length=9540 Score = 100 bits (110), Expect = 7e-16 Identities = 197/291 (68%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 7429 AAGGAACTGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATA 7488 ||||| | | ||||||||| | |||||| | || || ||| | | || || | Sbjct 919 AAGGACATTGGAACGTTATACCTTATATTTTCTCTATTCTCAGGTTTACTTGGAACAGCA 978 Query 7489 TTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAAT 7548 ||||| | | ||||| | |||||| ||| || ||| ||| | | | | | Sbjct 979 TTTTCAGTTTTAATAAGACTTGAATTATCTGGACCTGGTGTTCAG---TACATAGCTGAC 1035 Query 7549 AGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTT 7608 | |||| | || || ||| ||||| || || || | | |||||||||||| | ||| Sbjct 1036 AACCAATTATATAATAGTATAATTACAGCCCACGCAATATTGATGATTTTCTTTATGGTT 1095 Query 7609 ATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCT 7668 ||||| | ||||||||| ||||| ||||||| || | ||||| | | || | ||| Sbjct 1096 ATGCCAGCTATGATAGGAGGTTTTGGAAATTTTTTATTACCTTTGTTAGTAGGAGGACCT 1155 Query 7669 GATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 || ||||| || || || | || || |||||||| |||||| |||| ||| Sbjct 1156 GACATGGCATTCCCTAGATTAAATAACATAAGTTTCTGATTATTACCTCCT 1206 >seq98 Length=448780 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| || | | ||| | || || Sbjct 219556 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 219497 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || |||||||| || || ||||| ||||||||| Sbjct 219496 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCT 219437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192524568781196