Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq127 100 4e-16 >seq127 Length=55032 Score = 100 bits (110), Expect = 4e-16 Identities = 373/582 (64%), Gaps = 2/582 (0%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||| || | |||||||||| | ||||| || | | | || || ||||| Sbjct 47602 CCGGGGCACTCGTGAGGGCACATCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATG 47543 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || | || || ||||| || || || || || || | | |||||| || || Sbjct 47542 AACAAGTCGGGGATCCACAGGGCGTAGAAGAGGTCACGAGCACGGACTTCTTCCTTGCCG 47483 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| ||| || || || || || || | |||||||| || || || || Sbjct 47482 TGGTTCTTGCGAAGGTCCAGGAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATA 47423 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | |||||||| || ||| Sbjct 47422 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAA 47363 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| | |||||| || || || || || || ||| ||| ||| Sbjct 47362 ACACGAAGCATGGGAACGAGACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCA 47303 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || ||||| | || | || || || || || |||| || || | ||| Sbjct 47302 GTGGCACGAATGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCG 47243 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || ||| | || |||||||||||||| || ||||||||| |||||| | ||| || Sbjct 47242 CAGATTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAG 47183 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 ||| | | || ||| || ||||| | || | || || || ||||| ||| Sbjct 47182 CAGGACGCAAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGTA 47123 Query 78435 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || | || | || | |||| ||||| || || || || | || ||||| || Sbjct 47122 AAGTACTTGTTGGACATGTAG-TTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTG 47064 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || || || || ||||| | ||| ||||| ||||| || Sbjct 47063 GATACCGACAGCAACTCGCATGATCATGTGCTGTGGTCTCTC 47022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665031421760