Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq416 179 8e-40 seq104 156 9e-33 seq157 118 2e-21 seq98 111 3e-19 >seq416 Length=196129 Score = 179 bits (198), Expect = 8e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| || || || | |||| || |||||||||||||||||| Sbjct 78217 CCACCGCGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTG 78276 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| ||||| || ||||||||||||| ||| || ||||| ||| Sbjct 78277 AGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGA 78336 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||| ||||| || || | ||||||||||| |||| || || Sbjct 78337 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCAC 78395 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 78396 CTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 ||||| || || || || ||||| || | || || || |||||||||||||| | | Sbjct 77989 CCACCGCGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAC 78048 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||| ||||| || || || || || ||||| | || |||||||| || Sbjct 78049 AAG-GTCCTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGG 78107 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||| | || ||| | ||||| |||||||| | |||||| Sbjct 78108 GATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGAC 78167 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 78168 CTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 Score = 138 bits (152), Expect = 2e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| || || || ||||||||||| Sbjct 78444 ACCACCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCT 78503 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| |||||||| || || || || |||||||| | || || || || || Sbjct 78504 CAAAGTGCGACCATCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGG 78563 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || ||| | |||||||||||||||| || | Sbjct 78564 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAA 78622 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | ||||| ||||| ||||| ||||| Sbjct 78623 CCTCGAGGGTGATGGTCTTTCCCGT 78647 >seq104 Length=125481 Score = 156 bits (172), Expect = 9e-33 Identities = 144/180 (80%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||| ||||| || || || ||||| |||||| Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATC 283030 || || |||||||| ||||| ||||||||||| |||||||| ||| || || | || Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTC 107561 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | ||||| ||||| ||||| ||||| ||||||| ||||||||||| Sbjct 107560 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 107501 >seq157 Length=447866 Score = 118 bits (130), Expect = 2e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | | ||||||| | ||||| || |||||||||| || | |||||| Sbjct 174317 AGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAACCTCATGT 174376 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | ||||| || || ||||| || || ||| | || | || || || || |||| | | Sbjct 174377 GCCAATACATTGAGTTCGTCGCCGACCGTCTGCTCCTCGCACTCGGCAACAAGAAGTTCT 174436 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| ||| || || || || || |||| Sbjct 174437 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 174496 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| |||| || || | | | ||||| Sbjct 174497 TCTTCGAGAAGCGTGTCGGCGAGTACCAGAAGGCTGGTGT 174536 >seq98 Length=448780 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||| | Sbjct 219572 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 219513 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || |||||||| || |||||||| || Sbjct 219512 AAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCCGGGGG 219453 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 219452 GATACCCTCCTTGTCT 219437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733379475836