Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq416 152 4e-32 seq104 118 8e-22 >seq416 Length=196129 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| |||||| |||||||||||||||||| || ||| ||| |||| || Sbjct 78235 ACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCG 78294 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||||| ||||||||| || | ||| | || ||||| ||| Sbjct 78295 AGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 78354 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| || |||||||| | || || ||||| Sbjct 78355 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 78414 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||||||||| ||||| Sbjct 78415 CCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 118 bits (130), Expect = 8e-22 Identities = 155/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186 |||||||||||| || |||||| ||||||||||| || | | || | || |||| | Sbjct 78006 CACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTCCTGC-CGTCCT 78064 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || || ||||| | ||||| || |||| || | ||| ||||| || Sbjct 78065 CGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCTT 78124 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | |||||||| | ||||| ||||| | || || |||| Sbjct 78125 GAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGTGTGATAGTCT 78184 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| ||||| ||||||||||||||| Sbjct 78185 TGCCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| || |||||||| ||| | ||| | || || Sbjct 78463 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCCTCA 78522 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | ||||||||||| | ||| | || ||||| ||| Sbjct 78523 AGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGG 78582 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | || || ||||| | || || |||||| Sbjct 78583 ATCTTGCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTT 78642 Query 44309 CCCGT 44313 ||||| Sbjct 78643 CCCGT 78647 >seq104 Length=125481 Score = 118 bits (130), Expect = 8e-22 Identities = 141/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| ||| |||| || |||||||| ||||| |||| Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 |||| ||||| || || | || | || ||||| ||| ||||| ||||| | Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 107562 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| |||| Sbjct 107561 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 107502 Query 44328 AGAT-TTGCA 44336 || | ||||| Sbjct 107501 AGCTGTTGCA 107492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988495875778