Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq416 159 8e-34 seq104 120 7e-22 >seq416 Length=196129 Score = 159 bits (176), Expect = 8e-34 Identities = 161/207 (78%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||||||||| || || ||||| |||||||| ||| || ||| Sbjct 78212 CAAATCTTCGTCAAGACTCTCACAGGCAAGACTATCACACTCGAGGTCGAATCATCGGAC 78153 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||| || || ||||| || ||||| || Sbjct 78152 ACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAACAG 78093 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || ||||||||||| || || |||||||| || || ||||| |||| | || || ||| | Sbjct 78092 CGCCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCAGGAC-CTTGTCGGACTACAACAT 78034 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 78033 CCAGAAGGAGTCGACTCTTCACCTGGT 78007 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || ||||||||||||||||| || ||| Sbjct 78440 CAGATCTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 78381 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || || |||||||||||||| Sbjct 78380 ACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 78321 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || || ||||| || || | ||||| || || ||| || Sbjct 78320 CGTCTGATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACTCTCAGTGACTACAACATC 78261 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 78260 CAAAAGGAGTCCACGCTCCACCTCGT 78235 Score = 109 bits (120), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || |||||||||||||| || || ||||| ||||| ||||| || Sbjct 78647 ACGGGAAAGACCATCACCCTCGAGGTTGAGTCTTCGGACACTATCGACAACGTGAAGAGC 78588 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || |||||||| ||||| || || ||||| || || || Sbjct 78587 AAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCGGGCAAG 78528 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | ||| | ||| || ||| | || || || || || || || Sbjct 78527 CAGCTTGAGGATGGTCGCACTTTGAGCGACTACAACATTCAGAAGGAGTCCACCCTCCAC 78468 Query 178125 CTTGT 178129 || || Sbjct 78467 CTCGT 78463 >seq104 Length=125481 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||||||||| || ||| ||||||||| Sbjct 107501 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 107560 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||| |||||||| || || || || |||||||| || || | Sbjct 107561 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCTTG 107620 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||| || || | || || |||| || ||| |||| || Sbjct 107621 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 107679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724506502196