Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq104 150 2e-31 seq416 149 6e-31 seq98 111 1e-19 >seq104 Length=125481 Score = 150 bits (166), Expect = 2e-31 Identities = 144/182 (79%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| | Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 ||| |||||||||||||| ||||| || |||||||||| ||| || |||| || | Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACATTG 107563 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || || |||||||| ||||| ||| Sbjct 107562 TCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACG 107503 Query 41852 AA 41853 || Sbjct 107502 AA 107501 >seq416 Length=196129 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || |||||| |||||| || ||||| ||||| Sbjct 78216 GCCACCGCGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACT 78275 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| ||||| ||||||||||| || ||||| ||||| ||||||| || Sbjct 78276 GAGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGG 78335 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || |||| || | | | ||||||| ||||||| Sbjct 78336 AATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACATTGTCGATAGTGTCGGAAGACTCCA 78394 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 78395 CCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||||| || || || ||||||||| ||||| ||||| || Sbjct 77988 GCCACCGCGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 78047 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| | |||| ||||||||||| || ||||| || |||||||||||||| | || Sbjct 78048 CAAGGTCCTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGG 78107 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | ||| | || | | ||| | | | ||||| || || | Sbjct 78108 GATACCCTCCTTGT-CTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGA 78166 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||||| ||||| || |||||| Sbjct 78167 CCTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||||||||| |||||| Sbjct 78445 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 78504 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || ||||||||||| || || || |||||||| || |||| ||| Sbjct 78505 AAAGTGCGACCATCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 78564 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | |||||| ||||| || Sbjct 78565 ATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACGTTGTCGATAGTGTCCGAAGACTCAAC 78623 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || ||||| Sbjct 78624 CTCGAGGGTGATGGTCTTTCCCGT 78647 >seq98 Length=448780 Score = 111 bits (122), Expect = 1e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || || || ||| ||||||||| ||||| ||||| Sbjct 219574 CCACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCC 219515 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || || || |||| || ||||||||||| ||||| |||| |||||||||||||| | Sbjct 219514 GAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCCGGG 219455 Query 41753 GGAACGCTCTCCTTGTCCATG 41773 || | | ||||||||| ||| Sbjct 219454 GGGATACCCTCCTTGTCTATG 219434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301492000800