Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 116 8e-21
seq1113 87.8 4e-12
>seq2619
Length=45072
Score = 116 bits (128), Expect = 8e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|||||||| ||| | || ||| | ||||||||||| || || || ||||| | || |
Sbjct 29859 GGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCGGACCGTCTGTTGTTG 29918
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
||||| || | |||| | |||||| | | ||||| || | || |||||| ||||
Sbjct 29919 GCACTCGGGAATCAGAAGTTCTACAACGCCACCAACCCATTCGATTTCATGGAGAACATT 29978
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
|| || || ||||||||||||||||| |||||||| ||||||| |||| | | |||
Sbjct 29979 TCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGT 30038
Query 230632 GTGATGAAG 230640
|| ||| ||
Sbjct 30039 GTCATGGAG 30047
>seq1113
Length=209381
Score = 87.8 bits (96), Expect = 4e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 319534 TTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCG 319593
||||||||||| || | |||| | ||||| |||| | |||||||| ||||||
Sbjct 24664 TTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACATCCAAGTGGTTGGTTGGCTCG 24723
Query 319594 TCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTC 319653
|||||||| || | | || ||| || | |||||| ||||| ||||| ||||| |||
Sbjct 24724 TCAAGAAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTTC 24783
Query 319654 CACCCTCCGGAAAGAG 319669
||||| || |||||||
Sbjct 24784 CACCCACCAGAAAGAG 24799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057778853724530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |