Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2619 116 8e-21 seq1113 87.8 4e-12 >seq2619 Length=45072 Score = 116 bits (128), Expect = 8e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 |||||||| ||| | || ||| | ||||||||||| || || || ||||| | || | Sbjct 29859 GGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCGGACCGTCTGTTGTTG 29918 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 ||||| || | |||| | |||||| | | ||||| || | || |||||| |||| Sbjct 29919 GCACTCGGGAATCAGAAGTTCTACAACGCCACCAACCCATTCGATTTCATGGAGAACATT 29978 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || || ||||||||||||||||| |||||||| ||||||| |||| | | ||| Sbjct 29979 TCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGT 30038 Query 230632 GTGATGAAG 230640 || ||| || Sbjct 30039 GTCATGGAG 30047 >seq1113 Length=209381 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 319534 TTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCG 319593 ||||||||||| || | |||| | ||||| |||| | |||||||| |||||| Sbjct 24664 TTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACATCCAAGTGGTTGGTTGGCTCG 24723 Query 319594 TCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTC 319653 |||||||| || | | || ||| || | |||||| ||||| ||||| ||||| ||| Sbjct 24724 TCAAGAAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTTC 24783 Query 319654 CACCCTCCGGAAAGAG 319669 ||||| || ||||||| Sbjct 24784 CACCCACCAGAAAGAG 24799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057778853724530