Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2619 170 2e-37 >seq2619 Length=45072 Score = 170 bits (188), Expect = 2e-37 Identities = 473/719 (66%), Gaps = 6/719 (1%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | ||| || || ||||| ||||| || ||||| ||||||| || |||||| Sbjct 30028 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCC 29969 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 |||||||| || || || || || || | | || | || | ||| ||| | | | Sbjct 29968 ATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCT-GATT-CCCGAGTGCCAACAACA 29911 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852 | ||||| ||||| || || || |||||||| | || ||| ||||| || | || Sbjct 29910 GACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCA-TTCATGCCGAGGAGC 29852 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || || || || || || | ||| |||||| || |||| ||||| || || Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATG 29792 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || || || || | | || || || |||| ||| |||||||| Sbjct 29791 CTCTGCACGAGTGATGCGTCTGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCATGCGAAG 29732 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | |||||||| | ||| | ||| || || ||||| | |||||||| Sbjct 29731 TCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATG 29672 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| ||||| || || | ||||| || ||||| ||||| || |||||| Sbjct 29671 AGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCG 29612 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 |||| || || ||||| ||||| ||| | |||| || |||| | |||||| | Sbjct 29611 ACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGC 29552 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 |||| || || || | || || || | || ||||| || || | | Sbjct 29551 AATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATAT 29492 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | | || | ||| | || || || ||||| || ||| ||| |||| ||||| Sbjct 29491 GATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGG 29432 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 ||||||||||| ||||| |||||||| |||||||| ||||| | ||| || ||||| Sbjct 29431 ATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCA 29372 Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||| || || | || || || || || || ||||| |||||||| || || Sbjct 29371 CCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGC 29313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517524050695080