Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 170 2e-37
>seq2619
Length=45072
Score = 170 bits (188), Expect = 2e-37
Identities = 473/719 (66%), Gaps = 6/719 (1%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| || | ||| || || ||||| ||||| || ||||| ||||||| || ||||||
Sbjct 30028 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCC 29969
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
|||||||| || || || || || || | | || | || | ||| ||| | | |
Sbjct 29968 ATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCT-GATT-CCCGAGTGCCAACAACA 29911
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852
| ||||| ||||| || || || |||||||| | || ||| ||||| || | ||
Sbjct 29910 GACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCA-TTCATGCCGAGGAGC 29852
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
|| || || || || || | ||| |||||| || |||| ||||| || ||
Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATG 29792
Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
|| || || || || | | || || || |||| ||| ||||||||
Sbjct 29791 CTCTGCACGAGTGATGCGTCTGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCATGCGAAG 29732
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| || | |||||||| | ||| | ||| || || ||||| | ||||||||
Sbjct 29731 TCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATG 29672
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| || ||||| ||||| || || | ||||| || ||||| ||||| || ||||||
Sbjct 29671 AGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCG 29612
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|||| || || ||||| ||||| ||| | |||| || |||| | |||||| |
Sbjct 29611 ACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGC 29552
Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212
|||| || || || | || || || | || ||||| || || | |
Sbjct 29551 AATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATAT 29492
Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272
| | || | ||| | || || || ||||| || ||| ||| |||| |||||
Sbjct 29491 GATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGG 29432
Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332
||||||||||| ||||| |||||||| |||||||| ||||| | ||| || |||||
Sbjct 29431 ATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCA 29372
Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
|| ||| || || | || || || || || || ||||| |||||||| || ||
Sbjct 29371 CCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGC 29313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517524050695080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |