Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2619 111 2e-19 >seq2619 Length=45072 Score = 111 bits (122), Expect = 2e-19 Identities = 462/721 (64%), Gaps = 10/721 (1%) Strand=Plus/Minus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 ||||| |||| ||| || || ||||||||||| || || || ||| ||| || || ||| Sbjct 30028 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCC 29969 Query 15974 ATAAAATCAAAGGGATTAGTAGC--TGAA-AATATCTTAGAGTACCCCAGTTCCGTAACT 16030 || ||||| || || || || || || | || ||| | | ||| ||| || | Sbjct 29968 ATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGA---TTCCCGAGTGCCAACAAC 29912 Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 | | || || ||||| || || || || ||||| | | ||| || || | || Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || || || | ||| | |||| ||| || ||| |||| ||||| ||||| Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATG 29792 Query 16151 TCGGTGG-CTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAA 16209 | || | ||| | | || | | || ||||| |||| || || ||||| Sbjct 29791 -CTCTGCACGAGTGATGCGTCTGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCATGCGAA 29733 Query 16210 GTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCAT 16269 ||| || | || ||||| | ||| | ||| || || || || | || ||||| Sbjct 29732 GTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCAT 29673 Query 16270 TTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTC 16329 || || ||||| |||||||| || | || || || || || ||||| || ||||| Sbjct 29672 GAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTC 29613 Query 16330 AACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTT 16389 || | || || ||||| ||||| || | || | | || | | |||||| Sbjct 29612 GACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCG 29553 Query 16390 CTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA-ATT 16448 | | |||| || || || | ||||| || | || ||||| || || | || Sbjct 29552 CAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATA 29493 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 | | | || | ||| | || || || || || || | ||| |||| |||| Sbjct 29492 TGATCGCTGCTTGGGT-TCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGT 29434 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 | |||||||| || ||||| ||||| ||||||||||| || || | ||| ||||||| Sbjct 29433 GGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTT 29374 Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628 | || || || || ||||||||||||| || || |||||| ||| || || || | Sbjct 29373 CACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAG 29314 Query 16629 C 16629 | Sbjct 29313 C 29313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511393105982920