Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 141 1e-28
>seq2619
Length=45072
Score = 141 bits (156), Expect = 1e-28
Identities = 550/854 (64%), Gaps = 18/854 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|| ||||| ||||| ||||| || ||||| || || || || || ||| || || ||
Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA-AT 23962
|||||||||||| |||| ||||| | || |||| ||| | | |||| | | || |
Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAA-CTTCTGATTCCCGAGTGCCAACAA 29913
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
|| | || ||||||||||| || || ||| | | | |||||| || | ||
Sbjct 29912 CAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAG 29853
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
| ||||| || || | || || |||||||| ||||| | || || || || ||
Sbjct 29852 CATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT 29793
Query 24083 AGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATG 24138
| ||| | || | | || | | | | | | | || |||| || ||||
Sbjct 29792 -GCTCTGCACGAGTGATGCGTC--TGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATG 29737
Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198
|||| || ||| | |||||||| | || ||||| || || || || || ||||
Sbjct 29736 CGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGG 29677
Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258
|||| ||||||||||| || | ||| || ||||| || || || ||||| ||||| || |
Sbjct 29676 GCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGC 29617
Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTATCC 24315
| || || || || ||||| || | || || || | | ||||| ||||
Sbjct 29616 CCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCC 29557
Query 24316 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 24375
| ||||| || |||||||| | ||| || || | || || || || ||||
Sbjct 29556 ATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGA 29497
Query 24376 GATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCG 24435
|||| | | || || | | || || || || | || || ||||||
Sbjct 29496 GATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCG 29437
Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495
| || ||||| || || || || ||||||||||| |||| || |||| |||||||
Sbjct 29436 AGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTA 29377
Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555
|||| | || || || | | || ||||| || ||||||||| || || || |
Sbjct 29376 CTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGA 29317
Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGT---TTATTCCAATCA 24611
| || | |||||| || || ||| ||||| | || | ||| || ||||| ||
Sbjct 29316 AAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCTCTTGTTCCAGTCG 29258
Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671
| | || || || | ||| | || || | ||||| || ||||| || ||||| ||
Sbjct 29257 TGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTG 29198
Query 24672 TACATATTCCAGAT 24685
||||| | ||| ||
Sbjct 29197 TACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593696878916880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |