Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2619 264 1e-65 seq1001 132 5e-26 seq224 105 7e-18 seq2223 89.7 5e-13 >seq2619 Length=45072 Score = 264 bits (292), Expect = 1e-65 Identities = 509/737 (69%), Gaps = 13/737 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| |||||| | || ||| Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | | | ||||||| ||||||| | |||||| Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || |||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCGC 29363 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || || ||| | |||| || || ||||||||||| || |||||| ||| Sbjct 29364 TTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGATG 29423 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | |||||||||| || || || |||||||| ||| | || | || Sbjct 29424 GAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAAG 29483 Query 116933 GAGAAGCTC-CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 || | || | | || ||||||||||| | || || || || ||||||| || Sbjct 29484 CAG-CGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGCTGA 29542 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAG-CGCCTGGTGGCCT 117050 ||||| |||| |||||| | | || ||| || ||| || | || || | |||| Sbjct 29543 CTGGGCATTGCGATGGATCTCTGACA-AGAACTCGACTTTTGCCTGCCGATTGATCGCCT 29601 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 |||| |||||||||||| ||||||| || || |||||| |||| || ||| | |||| Sbjct 29602 TCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGAAGA 29661 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 | || |||||||||||||| || || ||| || || | ||||| | |||||||| Sbjct 29662 AGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGGGCA 29721 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAG-CGCGGCG 117229 |||| ||||| || || |||||||| || | | | | | | || ||| | Sbjct 29722 TGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAG-AACAAGCCAGACGCATCA 29780 Query 117230 CGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 | ||| ||| | ||| || || || || || || ||||| |||||||| || || Sbjct 29781 CTCGTGCAGAG-CATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGC 29839 Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 ||| || || || || || | || ||| || | |||| || ||||||||||| | Sbjct 29840 GCTCCCAGTCATGCTCCTCGGCATGAA-TGCTAAGCTCATGTGCCAGTACATCGAGTTTG 29898 Query 117348 TCGCCGACAGGCTGCTG 117364 |||| ||| | ||| || Sbjct 29899 TCGCGGACCGTCTGTTG 29915 >seq1001 Length=158095 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || ||| | | Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| ||||||||||| | |||||| Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || |||| || || | | |||||||||| Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACTACAAC 24608 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| ||||| Sbjct 24607 ATCCAGAAGGAGAGCACTCTGCA 24585 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || |||||||| || || || |||||| |||| || || | || Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||| || || | |||||| Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| ||||| ||||| || |||| || ||| | |||||||||| Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 24835 ATCCAGAAGGAGTCCACTCTCCACCTTGT 24807 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || ||||| ||||||||| |||| || || || |||||| | | | | ||| Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGAGC 25160 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || || | ||||| || || || || |||| ||||| || ||||| | ||| ||||| Sbjct 25159 AAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCAAG 25100 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 || || || || | ||||| ||| ||||||||||| ||||||||| |||| || || Sbjct 25099 CAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCCAC 25040 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 || || | ||| || | || || Sbjct 25039 CTTGTCCTCCGCCTGCGCGGTGG 25017 >seq224 Length=177688 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| | || ||||| || |||||| | | Sbjct 19221 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 19162 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || |||| ||||| ||||| || || |||||||||| || || Sbjct 19161 GATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTCTG 19102 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || |||| || | ||||| | |||||||||||||| ||| Sbjct 19101 ATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAG 19042 Query 40879 G 40879 | Sbjct 19041 G 19041 >seq2223 Length=225719 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || || |||||||||| || | |||| ||| || || ||||| || Sbjct 207863 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGAAAGCAGCTCGAG 207922 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| ||| ||||||||||||||||||||| |||| || || || || | Sbjct 207923 GATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTC 207982 Query 40903 CGCTTGAGGGGCGG 40916 ||| || | || || Sbjct 207983 CGCCTGCGTGGTGG 207996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515197747560560