Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 264 1e-65
seq1001 132 5e-26
seq224 105 7e-18
seq2223 89.7 5e-13
>seq2619
Length=45072
Score = 264 bits (292), Expect = 1e-65
Identities = 509/737 (69%), Gaps = 13/737 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||| || || |||||||||| |||||| | || |||
Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243
Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | | | ||||||| ||||||| | ||||||
Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || || || |||||||| ||||| || ||||| ||||| ||||| |||||
Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCGC 29363
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| || || ||| | |||| || || ||||||||||| || |||||| |||
Sbjct 29364 TTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGATG 29423
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932
|||||| | |||||||||| || || || |||||||| ||| | || | ||
Sbjct 29424 GAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAAG 29483
Query 116933 GAGAAGCTC-CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991
|| | || | | || ||||||||||| | || || || || ||||||| ||
Sbjct 29484 CAG-CGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGCTGA 29542
Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAG-CGCCTGGTGGCCT 117050
||||| |||| |||||| | | || ||| || ||| || | || || | ||||
Sbjct 29543 CTGGGCATTGCGATGGATCTCTGACA-AGAACTCGACTTTTGCCTGCCGATTGATCGCCT 29601
Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110
|||| |||||||||||| ||||||| || || |||||| |||| || ||| | ||||
Sbjct 29602 TCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGAAGA 29661
Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170
| || |||||||||||||| || || ||| || || | ||||| | ||||||||
Sbjct 29662 AGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGGGCA 29721
Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAG-CGCGGCG 117229
|||| ||||| || || |||||||| || | | | | | | || ||| |
Sbjct 29722 TGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAG-AACAAGCCAGACGCATCA 29780
Query 117230 CGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288
| ||| ||| | ||| || || || || || || ||||| |||||||| || ||
Sbjct 29781 CTCGTGCAGAG-CATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGC 29839
Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347
||| || || || || || | || ||| || | |||| || ||||||||||| |
Sbjct 29840 GCTCCCAGTCATGCTCCTCGGCATGAA-TGCTAAGCTCATGTGCCAGTACATCGAGTTTG 29898
Query 117348 TCGCCGACAGGCTGCTG 117364
|||| ||| | ||| ||
Sbjct 29899 TCGCGGACCGTCTGTTG 29915
>seq1001
Length=158095
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || || ||| | |
Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || |||| ||||| ||||||||||| | ||||||
Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| ||||| || |||| || || | | ||||||||||
Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACTACAAC 24608
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| ||| |||||
Sbjct 24607 ATCCAGAAGGAGAGCACTCTGCA 24585
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || |||||||| || || || |||||| |||| || || | ||
Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || || | ||||| ||||| || || | ||||||
Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| ||||| || |||| || ||| | ||||||||||
Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || || || ||
Sbjct 24835 ATCCAGAAGGAGTCCACTCTCCACCTTGT 24807
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| |||| || || || |||||| | | | | |||
Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGAGC 25160
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| || | ||||| || || || || |||| ||||| || ||||| | ||| |||||
Sbjct 25159 AAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCAAG 25100
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|| || || || | ||||| ||| ||||||||||| ||||||||| |||| || ||
Sbjct 25099 CAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCCAC 25040
Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916
|| || | ||| || | || ||
Sbjct 25039 CTTGTCCTCCGCCTGCGCGGTGG 25017
>seq224
Length=177688
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| | || ||||| || |||||| | |
Sbjct 19221 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 19162
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || |||| ||||| ||||| || || |||||||||| || ||
Sbjct 19161 GATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTCTG 19102
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || || |||| || | ||||| | |||||||||||||| |||
Sbjct 19101 ATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAG 19042
Query 40879 G 40879
|
Sbjct 19041 G 19041
>seq2223
Length=225719
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| || || |||||||||| || | |||| ||| || || ||||| ||
Sbjct 207863 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGAAAGCAGCTCGAG 207922
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| ||| ||||||||||||||||||||| |||| || || || || |
Sbjct 207923 GATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTC 207982
Query 40903 CGCTTGAGGGGCGG 40916
||| || | || ||
Sbjct 207983 CGCCTGCGTGGTGG 207996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515197747560560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |