Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1779 417 7e-112 seq1001 104 2e-17 seq224 84.2 2e-11 >seq1779 Length=148467 Score = 417 bits (462), Expect = 7e-112 Identities = 1218/1858 (66%), Gaps = 48/1858 (3%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||||||||| | ||||| | ||| || || Sbjct 98748 TGGTTCGGAGGTAGTACATGCCAGTCTTCAGACCAAGTTTCCAGCCAGTAAAGTGCATGC 98689 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 || | || || | | ||| | ||||| | || || |||| |||||||| Sbjct 98688 TGGTGATCTTGCCCATAGTGGGCTCCTTCATGTGGATGTTCAAGCTCTGAGACTGATCGA 98629 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGAC--ATTTCCCATAC 22320 | ||||| || |||||||||||||| | | | || ||| ||| || ||||| || Sbjct 98628 TGAACGCACCACGATCGGCGGCCATCTGAACGATAGTTCGCT--GACTGATCTCCCAGAC 98571 Query 22321 GGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGT 22379 |||||||||| | | ||| || ||| || | || || | | || | || || Sbjct 98570 AGTCTTGTACAATGCCTTGAGGTCGTCCGGGAT-GTTTGGAATGCGTTGAATAGAGCCAC 98512 Query 22380 TATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTT 22439 || | ||||| || || || | ||| ||| | ||| | || | || | Sbjct 98511 CATCGGCAATGATGCGGTTCTTCATGTTCTCGGACCAGAGACCACGGTCGACGAGGTCCT 98452 Query 22440 TGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGT 22499 ||| ||| | |||| || || || |||||||| | ||| || ||||| ||| |||| Sbjct 98451 TGAGCAGCCAAGGGTTGACTACCTGGAACTCGCCAGCCAACACACGGCGAGAGTAGATGT 98392 Query 22500 TGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCG 22559 || ||| | || ||||| | || ||| |||| ||||| | || ||||| |||| Sbjct 98391 TGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGGGAAGTGGAAGCAGTCG 98332 Query 22560 GCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCA 22619 |||| || |||| || || ||||||| || ||||||| | || | |||||| Sbjct 98331 GCATTGGAGCCACGAGAAGGGAGTTTCGCACACCGTGCTCCGCGATCCTGGCCTTGAGAG 98272 Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAA--CAC 22677 | ||| ||||| ||||| | || || ||| |||||||||||||||| | ||| Sbjct 98271 CAGCCCAATCCCAGAGATCAGTTGGAGTGACAC---CCCACATATCGTATTGAAGTTCAC 98215 Query 22678 GCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTC 22737 | ||| | || ||||||||| || ||||| || ||| || | || || || Sbjct 98214 CCTTTGACACT--GGTGAGCCTTCGTAGGTCTCGTATGGGCCAAGCTTCTCAGCCAGCTC 98157 Query 22738 GCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGC 22797 ||| ||| ||| ||| ||| || || || || || || || | | ||| || Sbjct 98156 ACAGGACGCAGTCAAGGCGGCGTGGTAGATGGTTTCAAAAAT---CTGGAT--ATTGAGC 98102 Query 22798 GGCGGCGACGCTT--------TCGTACGGCATACGCATCATCACGAACGCGTCCGCCATA 22849 ||||| ||||| ||| | ||||| || | | ||| || || || | | Sbjct 98101 --CGGCG-CGCTTCAGGAGAGTCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCAAGA 98045 Query 22850 CCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAA 22909 ||||| || || | |||||| || |||| | || | | | ||||| |||| Sbjct 98044 CCCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTTGCTCTTTCTCGCCTCTGGCACT 97985 Query 22910 GGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNN 22969 || || || ||||| || ||||||| || |||| || | | | Sbjct 97984 GGGTAGTGGTTGATCTCGATGGTCTTGTTCAAATTCTTGGTGACCACCTGAACCACTTCA 97925 Query 22970 NNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAA---CAAACT-TGTTGACGG--CG 23023 | |||||||| | | ||| | ||| | | | ||||| | | || Sbjct 97924 TGAAGCTTCTTGAAGTCGTAGATCTC--ATTCT-CAATGTCGACGTATGTTGGCAGAGCG 97868 Query 23024 ATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTA 23083 ||||| ||||| ||||| || |||||||| ||| | | |||||| | || || || Sbjct 97867 ATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCAGTG 97808 Query 23084 CATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAA 23143 || || || || || || || | || |||||||||| || || ||||| | | Sbjct 97807 CAGAGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCA 97748 Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203 |||||||| || ||| | || ||| ||||| ||| | ||| | || || ||| Sbjct 97747 TCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGGCATACCAG 97688 Query 23204 ATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAA 23262 || |||| ||| ||||| ||| | || | | || || | |||||||| | ||| | Sbjct 97687 ATCTTCTGGGCGCGAACA-GTCTCGCGGCCACGACCCTCCTTCTCGTACTGCTCGTAGAG 97629 Query 23263 CGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAG 23322 | || || || | || ||| || || || || || | | |||| |||||||| Sbjct 97628 CTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACATGAG 97569 Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 ||||| || | ||||| || |||| || |||||||| ||||| || ||| | Sbjct 97568 GGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGCGAA 97509 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 ||| || |||||||||||||||||||||||||| |||||| | ||||| || | Sbjct 97508 GAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAATGC 97449 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || || || || ||||| ||||||||||||| |||||| || || || | ||| ||||| Sbjct 97448 CAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCC 97389 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 ||||| || ||||| || || ||||||||||| || | ||||| || || || ||||| Sbjct 97388 ACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCCGTT 97329 Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622 ||||| |||| ||| | | ||| || | || || | | |||||||| || Sbjct 97328 GGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGAACGTTGAG 97269 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 ||| |||||||| | || || ||||| || || || |||||||||||||| || Sbjct 97268 ACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACC 97209 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 ||| |||||||| || || | | |||||||| || || | | || || || ||||| Sbjct 97208 CTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGT 97149 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGT 23801 | | || || || || || ||||| || ||||| || ||||| ||| |||| Sbjct 97148 ACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATGTAG-TTGT 97090 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 | || || || || || ||||||||||| ||||| ||||| | || || ||||| |||| Sbjct 97089 AGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACACGCATGATCA 97030 Query 23862 TGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918 | | || |||| || | ||| | ||||| ||| || ||| || || || | || Sbjct 97029 TTTGCTGCGGTCGCTCTGCAACCTT---GCCGTCAATGCGGAGCAGGTACGATCGCTCCA 96973 Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 ||| || || ||||| || | ||||| |||||||| || | || ||||| || || Sbjct 96972 ACGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCTGAGTT 96915 >seq1001 Length=158095 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || ||||| | || || ||| | || Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || |||||||| ||| | || || |||||| Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || ||| ||| ||||||| || ||| Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACTACAAC 24608 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || |||| || Sbjct 24607 ATCCAGAAGGAGAGCACTCTGCACTTGGTGCT 24576 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || |||||| |||| ||||| | ||| Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || |||||||| || | || || |||||| Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| | || ||| ||| || ||| || ||| Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || ||||| || || || ||| | || | || |||| Sbjct 24835 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGTA 24787 >seq224 Length=177688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || | ||||||| || Sbjct 19221 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 19162 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||| || | || || |||||||||||||| Sbjct 19161 GATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTCTG 19102 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGA 31347 || |||||||| || || ||||| || Sbjct 19101 ATCTTCGCTGGAAAGCAATTGGAGGA 19076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445747839401520