Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 100 6e-16
seq1779 87.8 4e-12
>seq2619
Length=45072
Score = 100 bits (110), Expect = 6e-16
Identities = 279/423 (66%), Gaps = 15/423 (4%)
Strand=Plus/Plus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
||||| ||||| || || || |||||||| |||| | ||||||||||| |||||| |
Sbjct 29598 GCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTG 29657
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
||||| | || | |||| ||||| || | ||| ||||| || || || | |||||
Sbjct 29658 AAGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAG 29717
Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100
|| | || ||||| |||||| ||||||| | | | | | |
Sbjct 29718 GGCATGCACACAGACTTCGCATGCCTGCTGTT-------CTCTCACCTCAAGAACAAGCC 29770
Query 102101 AGAGAAAGGATTCTTGAA----ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
||| | | || || | || || |||||| || ||||| |||||||| ||
Sbjct 29771 AGACGCATCACTCGTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCT 29830
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGAGCCAGTACA 102215
||||| | | || || || | | | || ||||| ||| ||| | ||| |||||||||
Sbjct 29831 CACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAA-TGCTAAGCTCATGTGCCAGTACA 29889
Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAAT-GGGACTAGAAAAGCACTATAATGTT 102274
| || ||||| || || || ||| | | | | |||| | | ||| ||| || |
Sbjct 29890 TCGAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAAT-CAGAAGTTCTACAACGCC 29948
Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334
|||||||| ||| |||||||| || ||||| || | ||||||||||| || ||
Sbjct 29949 ACCAACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAG 30008
Query 102335 AAG 102337
|||
Sbjct 30009 AAG 30011
>seq1779
Length=148467
Score = 87.8 bits (96), Expect = 4e-12
Identities = 179/266 (67%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || || || | |||||||| |||||||||| || || ||| |||||
Sbjct 97279 TGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTG 97220
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| || |||||||||||||| || || | | | | | | |||||| |||| || ||
Sbjct 97219 TCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGT 97160
Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953
| | || ||| |||| || ||||| || || || || || || | | |||
Sbjct 97159 GCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGAC 97100
Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013
||| | || || ||||| ||| | ||||| ||||| || || |||||||||
Sbjct 97099 ATGTAGTTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACA 97040
Query 95014 CGCATAATCATGTCCTGAGGGCGCTC 95039
||||| ||||| | ||| || |||||
Sbjct 97039 CGCATGATCATTTGCTGCGGTCGCTC 97014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989541766101105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |