Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2619 100 6e-16 seq1779 87.8 4e-12 >seq2619 Length=45072 Score = 100 bits (110), Expect = 6e-16 Identities = 279/423 (66%), Gaps = 15/423 (4%) Strand=Plus/Plus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 ||||| ||||| || || || |||||||| |||| | ||||||||||| |||||| | Sbjct 29598 GCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTG 29657 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | || | |||| ||||| || | ||| ||||| || || || | ||||| Sbjct 29658 AAGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAG 29717 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100 || | || ||||| |||||| ||||||| | | | | | | Sbjct 29718 GGCATGCACACAGACTTCGCATGCCTGCTGTT-------CTCTCACCTCAAGAACAAGCC 29770 Query 102101 AGAGAAAGGATTCTTGAA----ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 ||| | | || || | || || |||||| || ||||| |||||||| || Sbjct 29771 AGACGCATCACTCGTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCT 29830 Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGAGCCAGTACA 102215 ||||| | | || || || | | | || ||||| ||| ||| | ||| ||||||||| Sbjct 29831 CACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAA-TGCTAAGCTCATGTGCCAGTACA 29889 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAAT-GGGACTAGAAAAGCACTATAATGTT 102274 | || ||||| || || || ||| | | | | |||| | | ||| ||| || | Sbjct 29890 TCGAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAAT-CAGAAGTTCTACAACGCC 29948 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334 |||||||| ||| |||||||| || ||||| || | ||||||||||| || || Sbjct 29949 ACCAACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAG 30008 Query 102335 AAG 102337 ||| Sbjct 30009 AAG 30011 >seq1779 Length=148467 Score = 87.8 bits (96), Expect = 4e-12 Identities = 179/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | |||||||| |||||||||| || || ||| ||||| Sbjct 97279 TGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTG 97220 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || |||||||||||||| || || | | | | | | |||||| |||| || || Sbjct 97219 TCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGT 97160 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 | | || ||| |||| || ||||| || || || || || || | | ||| Sbjct 97159 GCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGAC 97100 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013 ||| | || || ||||| ||| | ||||| ||||| || || ||||||||| Sbjct 97099 ATGTAGTTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACA 97040 Query 95014 CGCATAATCATGTCCTGAGGGCGCTC 95039 ||||| ||||| | ||| || ||||| Sbjct 97039 CGCATGATCATTTGCTGCGGTCGCTC 97014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989541766101105