Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 138 1e-27
>seq2619
Length=45072
Score = 138 bits (152), Expect = 1e-27
Identities = 373/567 (66%), Gaps = 8/567 (1%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || |||||||| || ||||| |||||||| | || ||||| || ||
Sbjct 29749 AACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAG 29690
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || |||||||| ||||||||||| || | ||| || ||||| ||||| || ||
Sbjct 29689 AATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 29630
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--- 33749
|| |||||||| || || || ||||| ||||| || | || || || | |
Sbjct 29629 GAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTC 29570
Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809
||||| ||||| ||||| || |||||||| | ||| || || | ||
Sbjct 29569 TTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCG 29510
Query 33810 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33869
||||| || |||||||| | | || || | | || || ||||| | ||
Sbjct 29509 ATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGG 29450
Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929
|| ||||||| || ||||| || || ||||| ||||||||||| |||| ||
Sbjct 29449 GAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCT 29390
Query 33930 TCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCA 33989
|||| ||||| ||||| | || || || | | || ||||| || ||||| |||
Sbjct 29389 TCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCA 29330
Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGT-- 34046
|| || || || || | |||||| || || ||| ||||| | || | |||
Sbjct 29329 GATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCT 29271
Query 34047 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105
|| ||||| || | | || || || | ||| | || || | ||||| || |||||
Sbjct 29270 CTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGC 29211
Query 34106 CTCTGCCTTTTTATACATATTCCAGAT 34132
|| ||||| || ||||| | ||| ||
Sbjct 29210 TTCGGCCTTCTTGTACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629791375969680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |