Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 120 4e-22
>seq2619
Length=45072
Score = 120 bits (132), Expect = 4e-22
Identities = 544/853 (64%), Gaps = 16/853 (2%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|| ||||| ||||| ||||| || ||||| || || || || || ||| || || ||
Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
||||||||||||||||| ||| | | || || | || | | || | | | | | |
Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
| | || |||||||| || || || ||| | | | |||||| || | ||
Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852
Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106
| ||||| || || | || || |||||||| ||||| | || || || || ||
Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793
Query 36107 GATATT----ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 36162
| | | | || | | || | | | | | | | || |||| || |||||
Sbjct 29792 GCTCTGCACGAGTGATGCGTC--TGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGC 29736
Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222
||| || ||| | |||||||| | || ||||| || || || || || |||||
Sbjct 29735 GAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGG 29676
Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282
||| ||||||||||| || | ||| || ||||| || || || ||||| ||||| || ||
Sbjct 29675 CATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCC 29616
Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA--CCGGCAC-TGTCATGTATCCA 36339
|| || || || ||||| || | || || || | | | ||||| |||||
Sbjct 29615 CTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCA 29556
Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399
||||| || |||||||| | ||| || || | || || || || |||||
Sbjct 29555 TCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAG 29496
Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459
||| | | || || | | || || || || | || || |||||||
Sbjct 29495 ATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGA 29436
Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519
|| ||||| || || || || ||||||||||| |||| || |||| ||||||||
Sbjct 29435 GTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTAC 29376
Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579
||| | || || || | | || ||||| || ||||||||| || || || ||
Sbjct 29375 TTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAA 29316
Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGT-TTGGTGTTAGT---TTATTCCAATCAT 36635
|| | |||||| || || ||| |||| | || | ||| || ||||| || |
Sbjct 29315 AGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCTCTTGTTCCAGTCGT 29257
Query 36636 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 36695
| || || || | ||| | || || | ||||| || ||||| || ||||| || |
Sbjct 29256 GAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGT 29197
Query 36696 ACATATTCCAGAT 36708
|||| | ||| ||
Sbjct 29196 ACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658145395330040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |