Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2619 114 1e-20 >seq2619 Length=45072 Score = 114 bits (126), Expect = 1e-20 Identities = 353/537 (66%), Gaps = 17/537 (3%) Strand=Plus/Plus Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591 ||||||| | ||||| | || ||| | || || |||| ||| ||||||||| ||||| Sbjct 29500 TCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGCTGACTGGGCATTGCGATGGA 29559 Query 52592 TCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651 || || | || | ||||||||| || || |||| || ||| || || || Sbjct 29560 TCTCTGACAAGAACTCGACTTTTGCCTGCCGATTGATCGCCTTCGCTGCCGTCGAGGGCA 29619 Query 52652 TGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCC 52710 | || || || ||| ||| || | || || | | || || | ||| | | |||||| Sbjct 29620 TCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCC-TCATGCCC 29678 Query 52711 GGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCG 52770 || || || || || || ||||| ||||| ||||| || ||||||||||| || || Sbjct 29679 GGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGGGCATGCACACAGACTTCGCA 29738 Query 52771 TGTTTG-TATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCT--AGA- 52826 || || | || | || | ||||| || | || | | | | | | ||| Sbjct 29739 TGCCTGCTGTTCTCTCACC-----TCAAGAACAA--GCCAGACGCATCACTCGTGCAGAG 29791 Query 52827 CATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATC 52886 ||| | || || || | ||||| |||| || | || || || | || || | Sbjct 29792 CATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGCGCTCCCAGT--C 29849 Query 52887 ATTGT--TGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGA 52944 || | | |||||||| || | | |||||| |||||||||||||||| |||||| | Sbjct 29850 ATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCGGACCGT 29909 Query 52945 CTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATG 53004 |||||| || ||||| | | ||| | ||| || || ||||| || || ||| Sbjct 29910 CTGTTGTTGGCACTCGGGAATCAGAAGTTCTACAACGCCACCAACCCATTCGATTTCATG 29969 Query 53005 AACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 | ||||| || || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 29970 GAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAC 30026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496043345135200