Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 131 2e-25
>seq2619
Length=45072
Score = 131 bits (144), Expect = 2e-25
Identities = 543/850 (64%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| ||||| ||||| || ||||| || || || || || | | || || ||
Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
||||||||||| || || ||||| | || || | || | | || | | | | | |
Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| | ||||||||||| || || || ||| | | | |||||| || | ||
Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
| ||||| || || | || || |||||||| ||||| | || || || || ||
Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793
Query 49909 GATCTA-ACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966
| ||| ||| | | | || | | | | | | || |||| || |||||||
Sbjct 29792 GCTCTGCACGAGTGATGCGTCTGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGCGA 29734
Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026
| || ||||| |||||||| | || | ||| || || || || || |||||||
Sbjct 29733 AGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCA 29674
Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086
| ||||||||||| || | ||| || ||||| || || || ||||| |||||||| || |
Sbjct 29673 TGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCT 29614
Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACT 50143
| || || || ||||| | | || || || | | | ||||| |||||
Sbjct 29613 CGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATC 29554
Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203
||||| || |||||||| | ||| || || | || ||||| || |||||||
Sbjct 29553 GCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT 29494
Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263
| | | || || | | || || ||||| | || || ||||||| |
Sbjct 29493 ATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGT 29434
Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323
| ||||| || || ||||| ||||||||||| |||| || |||| ||||| ||||
Sbjct 29433 GGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTT 29374
Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383
| | || || ||| | | || ||||| || ||||||||| || || || || |
Sbjct 29373 CACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAG 29314
Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATTCCAATCATTGA 50440
| | |||||| || || | | |||| | ||| || ||||| || | |
Sbjct 29313 CAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAA 29254
Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500
|| || || | ||| | || || | ||||| || ||||| || ||||| || ||||
Sbjct 29253 GGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTACA 29194
Query 50501 TATTCCAGAT 50510
| | ||| ||
Sbjct 29193 TCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718238893082840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |