Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2619 131 2e-25 >seq2619 Length=45072 Score = 131 bits (144), Expect = 2e-25 Identities = 543/850 (64%), Gaps = 10/850 (1%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| ||||| ||||| || ||||| || || || || || | | || || || Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||||||||| || || ||||| | || || | || | | || | | | | | | Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | ||||||||||| || || || ||| | | | |||||| || | || Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | ||||| || || | || || |||||||| ||||| | || || || || || Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793 Query 49909 GATCTA-ACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | ||| ||| | | | || | | | | | | || |||| || ||||||| Sbjct 29792 GCTCTGCACGAGTGATGCGTCTGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGCGA 29734 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || ||||| |||||||| | || | ||| || || || || || ||||||| Sbjct 29733 AGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCA 29674 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | ||||||||||| || | ||| || ||||| || || || ||||| |||||||| || | Sbjct 29673 TGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCT 29614 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACT 50143 | || || || ||||| | | || || || | | | ||||| ||||| Sbjct 29613 CGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATC 29554 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 ||||| || |||||||| | ||| || || | || ||||| || ||||||| Sbjct 29553 GCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT 29494 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | | || || | | || || ||||| | || || ||||||| | Sbjct 29493 ATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGT 29434 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | ||||| || || ||||| ||||||||||| |||| || |||| ||||| |||| Sbjct 29433 GGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTT 29374 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | || || ||| | | || ||||| || ||||||||| || || || || | Sbjct 29373 CACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAG 29314 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATTCCAATCATTGA 50440 | | |||||| || || | | |||| | ||| || ||||| || | | Sbjct 29313 CAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAA 29254 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 || || || | ||| | || || | ||||| || ||||| || ||||| || |||| Sbjct 29253 GGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTACA 29194 Query 50501 TATTCCAGAT 50510 | | ||| || Sbjct 29193 TCTGCCATAT 29184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718238893082840