Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 120 4e-22
>seq2619
Length=45072
Score = 120 bits (132), Expect = 4e-22
Identities = 369/566 (65%), Gaps = 6/566 (1%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || |||||||| || ||||| ||||| || | || ||||| || ||
Sbjct 29749 AACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAG 29690
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || |||||||| ||||||||||| || | ||| || || || || || || |||
Sbjct 29689 AATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 29630
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA--CCGGCAC 42233
|| |||||||| || || || || || ||||| || | || || || | | |
Sbjct 29629 GAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTC 29570
Query 42234 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292
||||| ||||| ||||| || |||||||| | ||| || || | ||
Sbjct 29569 TTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCG 29510
Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352
||||| || |||||||| | | || || | | || || ||||| | ||
Sbjct 29509 ATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGG 29450
Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412
|| |||| || || ||||| || || ||||| ||||||||||| |||| ||
Sbjct 29449 GAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCT 29390
Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472
|||| | ||||||||| | || || ||| | | || || || || |||||||||
Sbjct 29389 TCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCA 29330
Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGT-GTTAAT 42529
|| || || || || | |||||| || || ||| ||||| || | |
Sbjct 29329 GATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTCTC 29270
Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589
|| ||||| || | | || || || | ||| | || || | ||||| || ||||||
Sbjct 29269 TTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCT 29210
Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615
|| ||||| || ||||| | ||| ||
Sbjct 29209 TCGGCCTTCTTGTACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671111255441560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |