Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 86.0 6e-12
>seq1001
Length=158095
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
|| || || |||||||| ||||||| ||| | ||| || || || || ||||| ||
Sbjct 24597 TCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 24656
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
|| || || ||||| || || || ||||| || ||||| ||| || || | |
Sbjct 24657 ATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTG 24716
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173
|| | ||||| | | ||| ||||| | || | ||||||||||| | ||| || |||
Sbjct 24717 TCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACG 24776
Query 143174 AATATTTGCATA 143185
|| |||||||||
Sbjct 24777 AAGATTTGCATA 24788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506993289187920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |