Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1001 86.0 6e-12 >seq1001 Length=158095 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || || || |||||||| ||||||| ||| | ||| || || || || ||||| || Sbjct 24597 TCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 24656 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 || || || ||||| || || || ||||| || ||||| ||| || || | | Sbjct 24657 ATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTG 24716 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | ||||| | | ||| ||||| | || | ||||||||||| | ||| || ||| Sbjct 24717 TCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACG 24776 Query 143174 AATATTTGCATA 143185 || ||||||||| Sbjct 24777 AAGATTTGCATA 24788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506993289187920