Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 271 1e-67
seq1779 113 7e-20
>seq2619
Length=45072
Score = 271 bits (300), Expect = 1e-67
Identities = 578/845 (68%), Gaps = 25/845 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || ||||| ||||| | || ||| | ||||||
Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | | ||| || |||||| | || || ||
Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197
|| | | || ||||| |||| || || ||||| ||||| || || ||| |||| ||
Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAG-CG 29362
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| || | || || || | ||||| ||||||||||| ||||||||
Sbjct 29363 CTTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 29422
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314
|||||| | |||||||||| ||||| || || |||| ||||| |||| ||
Sbjct 29423 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 29482
Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
||| || | || || ||||| ||||| ||||||| | || | ||| ||||| |||||
Sbjct 29483 GCAGCG--ATCATAT-CTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGC 29539
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| | |||| | || |||||| |||| | || || | | ||| | || || | ||
Sbjct 29540 TGACTGGGCATTGCGATGGATCTCTGACAAGAACTCGACTTTTGCCTGCCGATTGATCGC 29599
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
||||| ||||| |||||||||||||| || ||| ||| || ||||||| ||| | ||
Sbjct 29600 CTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGAA 29659
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
|||||| || ||||||||||| || || | || || || || || || ||||||||
Sbjct 29660 GAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGGG 29719
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCAGA 125612
| | ||| ||||| || || ||||| || || || | | || || | |
Sbjct 29720 CATGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAGAACAAGCC-AG-ACGCA 29777
Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
|| || || | || ||||| | ||| | | | ||| ||| || ||||| ||
Sbjct 29778 TCACTCG-TGCAGAG--CATCATCGTTGAAGCTGTTGC------GATTGAGCAAGAATTC 29828
Query 125673 CTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC-AAGCTAATGTGCGAGTA 125731
|| || || | || || |||| | | |||||||| ||| ||||| |||||| ||||
Sbjct 29829 CTCACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAA-TGCTAAGCTCATGTGCCAGTA 29887
Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACG-AGTTGATTGGCCGCAAGATTTACAACG 125790
||| |||||||| || || ||||| ||| | | | | | | ||| | |||||||
Sbjct 29888 CATCGAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAATCAG-AAGTTCTACAACG 29946
Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850
||| || || || ||||||||| | ||| || |||| || ||||||||||| ||||
Sbjct 29947 CCACCAACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCG 30006
Query 125851 AGAAG 125855
|||||
Sbjct 30007 AGAAG 30011
>seq1779
Length=148467
Score = 113 bits (124), Expect = 7e-20
Identities = 374/570 (66%), Gaps = 14/570 (2%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||||| ||| || || || || ||||| | | ||||| || || | ||
Sbjct 97314 ACGAACGGCACGTCCAACGGACTGGTTCCTATGCTGCGTGTCTACAACAACACTG-CTCG 97372
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || || || || | ||| | ||| | || || ||
Sbjct 97373 CTACGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTCGAGCCATG 97432
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || ||| | | || || || | ||||| ||| |||| || |||| ||
Sbjct 97433 GCACGCTGATGTTCTGGCATTCATGGATCTCCGCAAGAACCATGGCAAAGAGGAGGTGCG 97492
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
||| | ||| | || | ||||| ||| | || ||| ||||||||||||| || | ||
Sbjct 97493 CGCCCGCGACCTTTTCTTCGCACTTTGGATCCCGGATCTGTTCATGAAGCGTGTTGAGGA 97552
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| | |||| ||| |||||||| | || || ||||| | ||| | ||
Sbjct 97553 GAACGGCGAGTGGACCCTCATGTGCCCGAATGAGTGCCCTGGTCTCGCAGATGTTTATGG 97612
Query 97106 CGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161
||| || || ||| ||| ||| | |||||| | ||||| || || |||||
Sbjct 97613 CGAGGACTTCGAG---AAGCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGCCGCGAGAC 97669
Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAAC 97219
||| || | |||| | ||| | |||| || ||| ||||||| ||||| ||
Sbjct 97670 TGTTCG-CGC-CCAGAAGATCTGGTATGCCATTCTTGA-GGCTCAGACGGAGACCGGCGG 97726
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| || ||||||||| | || ||||| |||||||| || | || ||
Sbjct 97727 CCCTTTCATCCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTAC 97786
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
||| | || || || ||||| || || | |||||| | |||| || ||| |||
Sbjct 97787 AATCCGCAGTTCTAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCAGATGAGGTGGC 97846
Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369
|| ||| || || ||| || ||||||
Sbjct 97847 TGTCTGCAACCTTGCTTCGATCGCTCTGCC 97876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741028344147560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |