Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1779 154 2e-32 seq2619 152 6e-32 >seq1779 Length=148467 Score = 154 bits (170), Expect = 2e-32 Identities = 470/722 (65%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||| || || || |||||| | | ||||| || |||| ||| ||||| | | | Sbjct 97624 TCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACATGAGGGTC 97565 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 ||||| |||| |||| || || ||||| || ||||| || |||||||| || | || Sbjct 97564 CACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGCGAAGAAA 97505 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | || | ||||| || || ||||| ||||| | ||| |||| | Sbjct 97504 AGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAATGCCAGA 97445 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 97444 ACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCC 97385 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | ||| ||||| || || || | || ||| |||| | ||||| || Sbjct 97384 TGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCCGTTGGAC 97325 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 63495 | || || || || ||| || ||| | ||||| || || |||| ||| Sbjct 97324 GTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGAACGTTGA--GAC 97267 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 | || || || || | || ||||| | || || || | ||||| |||||||||| Sbjct 97266 CAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCT 97207 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | ||||| || || |||||| || | || || | | || | | || | Sbjct 97206 CAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGTAC 97147 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTAC 63674 | || |||| | || || || ||||| || || | || | || | |||| ||||| Sbjct 97146 CAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATGTAG-TTGTAG 97088 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 ||||||||||| | || || ||| || || || || || |||||||| | ||| Sbjct 97087 GTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACACGCATGATCATT 97028 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 ||||| |||| || | | |||| || || | || ||| ||| ||||| || Sbjct 97027 TGCTGCGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGCAGGTACGATCGCTCCAACGTC 96968 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 || || ||||| || | ||| ||||| || || || | ||| | |||||||| | | Sbjct 96967 TTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCTGAGTTGAGCTCA 96908 Query 63855 TC 63856 || Sbjct 96907 TC 96906 >seq2619 Length=45072 Score = 152 bits (168), Expect = 6e-32 Identities = 550/851 (65%), Gaps = 12/851 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||||| ||||| || ||||| || || || || || | | || || || Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||||||||| || || ||||| | || || | || | | || | | | | | | Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | |||||||| || || || || ||| | | | |||||| || | || Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | ||||| || || | || || |||||||| ||||| | || || || || || Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793 Query 33253 GATCTA-ACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | ||| ||| | | | || | | | | | | || |||| || ||||||| Sbjct 29792 GCTCTGCACGAGTGATGCGTCTGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGCGA 29734 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || ||||| |||||||| | || | ||| || || || || || ||||||| Sbjct 29733 AGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCA 29674 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | ||||||||||| || | ||| || ||||| ||||| || ||||| |||||||| || | Sbjct 29673 TGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCT 29614 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACT 33487 | || ||||| ||||| || | || || || | | ||||| ||||| Sbjct 29613 CGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATC 29554 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 ||||| || |||||||| | ||| || || | || ||||| || ||||||| Sbjct 29553 GCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT 29494 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | | || || | | || || ||||| | || || ||||||| | Sbjct 29493 ATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGT 29434 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 | ||||| || || ||||| ||||||||||| |||| || |||| |||||||||| Sbjct 29433 GGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTT 29374 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | | || || || ||| || ||||| || ||||||||| || || || || | Sbjct 29373 CACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAG 29314 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGT---TTATTCCAATCATTG 33783 | | |||||| || || ||| ||||| | || | ||| || ||||| || | Sbjct 29313 CAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCTCTTGTTCCAGTCGTGA 29255 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | || || || | ||| | || || | ||||| || ||||| || ||||| || ||| Sbjct 29254 AGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTAC 29195 Query 33844 ATGTTCCAGAT 33854 || | ||| || Sbjct 29194 ATCTGCCATAT 29184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622921262035960