Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 154 2e-32
seq2619 152 6e-32
>seq1779
Length=148467
Score = 154 bits (170), Expect = 2e-32
Identities = 470/722 (65%), Gaps = 6/722 (1%)
Strand=Plus/Minus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
||||| || || || |||||| | | ||||| || |||| ||| ||||| | | |
Sbjct 97624 TCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACATGAGGGTC 97565
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
||||| |||| |||| || || ||||| || ||||| || |||||||| || | ||
Sbjct 97564 CACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGCGAAGAAA 97505
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
|| || | || | ||||| || || ||||| ||||| | ||| |||| |
Sbjct 97504 AGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAATGCCAGA 97445
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| ||||| ||||| || || | ||| ||||| | | || || || ||||| || |||
Sbjct 97444 ACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCC 97385
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | ||| | ||| ||||| || || || | || ||| |||| | ||||| ||
Sbjct 97384 TGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCCGTTGGAC 97325
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 63495
| || || || || ||| || ||| | ||||| || || |||| |||
Sbjct 97324 GTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGAACGTTGA--GAC 97267
Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555
| || || || || | || ||||| | || || || | ||||| ||||||||||
Sbjct 97266 CAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCT 97207
Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615
| ||||| || || |||||| || | || || | | || | | || |
Sbjct 97206 CAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGTAC 97147
Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTAC 63674
| || |||| | || || || ||||| || || | || | || | |||| |||||
Sbjct 97146 CAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATGTAG-TTGTAG 97088
Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
||||||||||| | || || ||| || || || || || |||||||| | |||
Sbjct 97087 GTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACACGCATGATCATT 97028
Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794
||||| |||| || | | |||| || || | || ||| ||| ||||| ||
Sbjct 97027 TGCTGCGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGCAGGTACGATCGCTCCAACGTC 96968
Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854
|| || ||||| || | ||| ||||| || || || | ||| | |||||||| | |
Sbjct 96967 TTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCTGAGTTGAGCTCA 96908
Query 63855 TC 63856
||
Sbjct 96907 TC 96906
>seq2619
Length=45072
Score = 152 bits (168), Expect = 6e-32
Identities = 550/851 (65%), Gaps = 12/851 (1%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|| ||||| ||||| ||||| || ||||| || || || || || | | || || ||
Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||||||||| || || ||||| | || || | || | | || | | | | | |
Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| | |||||||| || || || || ||| | | | |||||| || | ||
Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252
| ||||| || || | || || |||||||| ||||| | || || || || ||
Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793
Query 33253 GATCTA-ACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| ||| ||| | | | || | | | | | | || |||| || |||||||
Sbjct 29792 GCTCTGCACGAGTGATGCGTCTGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGCGA 29734
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| || ||||| |||||||| | || | ||| || || || || || |||||||
Sbjct 29733 AGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCA 29674
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| ||||||||||| || | ||| || ||||| ||||| || ||||| |||||||| || |
Sbjct 29673 TGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCT 29614
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACT 33487
| || ||||| ||||| || | || || || | | ||||| |||||
Sbjct 29613 CGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATC 29554
Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547
||||| || |||||||| | ||| || || | || ||||| || |||||||
Sbjct 29553 GCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT 29494
Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607
| | | || || | | || || ||||| | || || ||||||| |
Sbjct 29493 ATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGT 29434
Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667
| ||||| || || ||||| ||||||||||| |||| || |||| ||||||||||
Sbjct 29433 GGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTT 29374
Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727
| | || || || ||| || ||||| || ||||||||| || || || || |
Sbjct 29373 CACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAG 29314
Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGT---TTATTCCAATCATTG 33783
| | |||||| || || ||| ||||| | || | ||| || ||||| || |
Sbjct 29313 CAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCTCTTGTTCCAGTCGTGA 29255
Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843
| || || || | ||| | || || | ||||| || ||||| || ||||| || |||
Sbjct 29254 AGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTAC 29195
Query 33844 ATGTTCCAGAT 33854
|| | ||| ||
Sbjct 29194 ATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622921262035960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |