Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 116 3e-21
seq2619 111 1e-19
seq2223 89.7 5e-13
seq224 89.7 5e-13
>seq1001
Length=158095
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| || |||||||| ||| |
Sbjct 24789 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 24848
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| ||| |||| || ||||||||||| || ||
Sbjct 24849 AAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGA 24908
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||| |||| ||||| |
Sbjct 24909 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 24968
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || || || || || ||||| || |||||
Sbjct 24969 TCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| || || || | || | ||| |||||||| ||||||||||| ||
Sbjct 25017 CCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAG 25076
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| || |||||||| ||| | || | ||||||||| ||||||||
Sbjct 25077 AGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGA 25136
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| ||||| ||| || ||| | | || | ||| |||| |||||| |
Sbjct 25137 ATTCCTTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACC 25196
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 25197 TCGAGGGTGATGGTCTTGCCGGT 25219
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | || |||||| || |||||||| ||||||
Sbjct 24561 CCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 24620
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 24621 AATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 24680
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || || | || || |
Sbjct 24681 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCCACT 24740
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| || || || ||||| || |||||
Sbjct 24741 TCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787
>seq2619
Length=45072
Score = 111 bits (122), Expect = 1e-19
Identities = 328/501 (65%), Gaps = 5/501 (1%)
Strand=Plus/Plus
Query 46096 CGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAG 46155
|| ||||| | |||||||| || |||||| || | | ||||||| |||
Sbjct 29529 CGTAAGAAGGCTGACTGGGCATTGCGATGGATCTCTGACAAGAACTCGACTTTTGCCTGC 29588
Query 46156 CGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATC 46215
|| || | ||||| || || |||||| |||| || ||||| ||| || |||||
Sbjct 29589 CGATTGATCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATC 29648
Query 46216 TTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCG 46275
|| | | || | ||| |||||||||| || || || || || |||| |||
Sbjct 29649 TTCTGGTTGAAGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCG 29708
Query 46276 CGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGAC 46335
|| ||||||||| |||| || ||||| || || || || | | ||| | | | ||
Sbjct 29709 CGTGACGAGGGCATGCACACAGACTTCGCATGCCTG--CTGTT-CTCTCACCTCAAGAAC 29765
Query 46336 AAGCTTGCGCCCGACAC-CGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGA 46394
|||| | | | ||| ||||| |||||| || || || || || |||||| | ||
Sbjct 29766 AAGCCAGA-CGCATCACTCGTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGA 29824
Query 46395 GTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGA 46454
|| | || | || || || | || || |||||||| || || |||||| |
Sbjct 29825 ATTCCTCACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCA 29884
Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514
|||||||||||||| |||||||| ||| | || || | | |||| | |
Sbjct 29885 GTACATCGAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAATCAGAAGTTCTACAA 29944
Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574
||| ||| ||||| || || ||| | ||||| || || | ||||| || || || ||
Sbjct 29945 CGCCACCAACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTT 30004
Query 46575 CGAAAAGCGCGTCGGCGAGTA 46595
||| ||||| || || || ||
Sbjct 30005 CGAGAAGCGTGTTGGTGACTA 30025
>seq2223
Length=225719
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || | || | ||| |||||||| || |||||||| ||
Sbjct 207996 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 207937
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || ||| |||| || |||||||||||||| ||
Sbjct 207936 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 207877
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 207876 ATTCCCTCCTTGTC 207863
>seq224
Length=177688
Score = 89.7 bits (98), Expect = 5e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101
|| ||||||| |||||||| || || ||||| ||||| | ||||| || |||
Sbjct 19038 ACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCAGCGA 19097
Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161
|||| | ||||||||||||||| || ||||| || ||||| || || ||||| |
Sbjct 19098 AGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTGACAT 19157
Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221
|| | || |||| |||||||| || | ||| | ||| || || || || || || |
Sbjct 19158 TATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 19217
Query 131222 CGAA 131225
||||
Sbjct 19218 CGAA 19221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471993146567040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |