Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 138 1e-27
>seq2619
Length=45072
Score = 138 bits (152), Expect = 1e-27
Identities = 547/853 (64%), Gaps = 16/853 (2%)
Strand=Plus/Minus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|| ||||| ||||| ||||| || ||||| || || || || || ||| || || ||
Sbjct 30031 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTC 29972
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489
||||||||||||||||| ||||| | || || | || | | || | | | | | |
Sbjct 29971 TCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAAC 29912
Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549
| | || |||||||| || || || ||| | | | |||||| || | ||
Sbjct 29911 AGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGC 29852
Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609
| ||||| || || | || || |||||||| ||||| | || || || || ||
Sbjct 29851 ATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGAT- 29793
Query 32610 GATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665
| ||| | || | | || | | | | | | | || |||| || |||||
Sbjct 29792 GCTCTGCACGAGTGATGCGTC--TGGCTTGTT-CTTGAGGTGAGAGAACAGCAGGCATGC 29736
Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725
||| || ||| | |||||||| | || ||||| || || || || || |||||
Sbjct 29735 GAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGG 29676
Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785
||| ||||||||||| || | ||| || ||||| || || || ||||| ||||| || ||
Sbjct 29675 CATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCC 29616
Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCA 32842
|| || || || ||||| || | || || || | | ||||| |||||
Sbjct 29615 CTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCA 29556
Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902
||||| || |||||||| | ||| || || | || || || || |||||
Sbjct 29555 TCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAG 29496
Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962
||| | | || || | | || || || || | || || |||||||
Sbjct 29495 ATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGA 29436
Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022
|| ||||| || || || || |||||||||||||||| || |||| ||||||||
Sbjct 29435 GTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTAC 29376
Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082
||| | || || || | | || ||||| || ||||||||| || || || ||
Sbjct 29375 TTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAA 29316
Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGT---TTATTCCAATCAT 33138
|| | |||||| || || ||| ||||| | || | ||| || ||||| || |
Sbjct 29315 AGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGT-TCAGTCTCTTGTTCCAGTCGT 29257
Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33198
| || || || | ||| | || || | ||||| || ||||| || ||||| || |
Sbjct 29256 GAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGT 29197
Query 33199 ACATATTCCAGAT 33211
|||| | ||| ||
Sbjct 29196 ACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633605617147600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |