Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1001 105 6e-18 >seq1001 Length=158095 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGC 25080 ||||||| || ||||||| |||| || ||||| || ||||||||||| ||||| Sbjct 25221 TGACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGA 25162 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| ||||| ||||| || || || ||||| | ||||| ||||||| Sbjct 25161 GCAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCA 25102 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | ||| | || |||| |||||| | || ||||| ||||| || || ||||| || | Sbjct 25101 AGCAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCC 25042 Query 25201 A 25201 | Sbjct 25041 A 25041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433310408372765