Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 187 3e-42
>seq2619
Length=45072
Score = 187 bits (206), Expect = 3e-42
Identities = 381/560 (68%), Gaps = 7/560 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || ||||| || || | || ||||| || || ||||| ||||| |||||| |
Sbjct 29741 GCATGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAG 29682
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||| | ||| || || || || ||| |||||| || ||
Sbjct 29681 ACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAA 29622
Query 93211 TATACCTTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269
|| || || ||||| || || || | |||| || ||||||| | | | ||
Sbjct 29621 GATGCCCTCGACGGCAGCGAAGGCGATCAAT-CGGCAGGCAAAAGTCGAGTTCTTGTCAG 29563
Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCG 93328
||||||| || ||||| || || || || ||||| || | |||| ||||| |||
Sbjct 29562 AGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGA-TGTTGTCGATGGCG 29504
Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388
|| || || || ||||| | | || | ||||| || ||||| | ||| || ||
Sbjct 29503 TTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTAT 29444
Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448
|||| || |||| |||||||| || |||||||||||||| |||| ||||| |
Sbjct 29443 GTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGT 29384
Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508
||||| ||||| || | ||| || || || |||||||| || || || |||||
Sbjct 29383 ATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGTCAGATGCG 29324
Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCC 93565
|| || ||||| | | ||| || || | | ||| ||||| || || ||| | |
Sbjct 29323 GCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTCTCTTGTTC 29264
Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
|| ||| || || || || ||||| | || || | ||||| || |||||||| ||
Sbjct 29263 CAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGGATGCTTCGGCC 29204
Query 93626 TTTTTGTACATATCCCATAT 93645
|| |||||||| | ||||||
Sbjct 29203 TTCTTGTACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556837613708440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |