Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1113 87.8 4e-12
seq1779 86.0 1e-11
seq2626 84.2 4e-11
>seq1113
Length=209381
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437
|| || |||| ||||||||||| |||||||| | ||| | ||||||||||| | ||
Sbjct 25127 GCGTACGGTGCTAAGATTCTGCTCAACTCTACACATCTCCGCCTCAAGCGTGGCCAGCGA 25068
Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497
|| ||||| ||||||| || || | || |||| ||||| ||||| ||||| |||
Sbjct 25067 TACGGTCTGCTCGGTCCAAACGGTTCCGGAAAGACTACTCTCATGCGTGCCATCAACAAC 25008
Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556
| ||| | | ||| |||| || ||| || || | ||| || || || ||||||||
Sbjct 25007 GAGCAGGTCG-AGGGCTTCCCAAAGCAGAGCGAAGTCAAGACCGTCTACGTCGAGCACGA 24949
Score = 84.2 bits (92), Expect = 4e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAG 280761
||||||| ||||| |||||||||||||| || ||| ||||| | || | | ||
Sbjct 23755 CTCACTCCCGCATGCGCGGTCTTTCTGGTGGTCAGCGTGTCAAGGTCGTGCTTGCTGCTT 23696
Query 280762 CTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCG 280821
| ||||| | |||||| |||||||||| |||||||| |||||||| || ||||| |
Sbjct 23695 GTTCATGGCAGCGTCCTCACTTGATCGTTCTTGACGAGCCAACCAACTACCTCGACCGTG 23636
Query 280822 A 280822
|
Sbjct 23635 A 23635
>seq1779
Length=148467
Score = 86.0 bits (94), Expect = 1e-11
Identities = 166/241 (69%), Gaps = 8/241 (3%)
Strand=Plus/Minus
Query 293106 GTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGT 293165
||||| |||||| | |||||||| || ||||||||||| || || | | || | ||
Sbjct 98651 GTTCAAGCTCTGAGACTGATCGATGAACGCACCACGATCGGCGGCCATCTGAACGATAGT 98592
Query 293166 CTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACAT----CAGGATGAATGC 293221
| | ||||||||| |||||||||| |||||||| | | ||||| ||
Sbjct 98591 TCGCTGACTGATCTCCCAGACAGTCTTGTACAATGCCTTGAGGTCGTCCGGGATGTTTG- 98533
Query 293222 CAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACC 293281
||| | | || ||||| || || | |||||| || |||||||||| |||||||||
Sbjct 98532 GAAT-GCGT--TGAATAGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCTCGGACC 98476
Query 293282 AAGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAG 293341
| ||||| | | ||| || || || ||| |||||| || ||||||| ||||
Sbjct 98475 AGAGACCACGGTCGACGAGGTCCTTGAGCAGCCAAGGGTTGACTACCTGGAACTCGCCAG 98416
Query 293342 C 293342
|
Sbjct 98415 C 98415
>seq2626
Length=39097
Score = 84.2 bits (92), Expect = 4e-11
Identities = 145/208 (70%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 279704 TCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGA 279763
||| || || || |||||||||||||| || || | | ||||| | ||||||| ||
Sbjct 31484 TCTTTCTGGAGGATGGAAGATGAAGCTTGCACTGGCCAGAGCCATGTTGATGCGTGCAGA 31543
Query 279764 TGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGT 279823
||| | || || || || || ||||||||| ||||| |||||| |||||
Sbjct 31544 AGTCTTCCTTCTCGACGAACCCACCAACCACTTGGACGTGGGCAACGTGAAATGGCTCCA 31603
Query 279824 GTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTCTCACGACTCTGG 279880
| |||||| | |||| | | | || | | || || ||||| ||||||||||||||
Sbjct 31604 GGACTACCTTA--AGTC-GCATACCGATATCACCTCGCTGATTGTATCTCACGACTCTGG 31660
Query 279881 CTTCCTAGATGCCGTGTGCTCTGCCATC 279908
||||| |||| || ||| | | ||||
Sbjct 31661 ATTCCTGGATGAGGTCTGCACAGACATC 31688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027792933531371
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |