Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1001 168 1e-36 seq224 141 2e-28 seq2619 131 3e-25 seq2223 84.2 4e-11 >seq1001 Length=158095 Score = 168 bits (186), Expect = 1e-36 Identities = 177/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || ||||| || || || || | |||||||| || ||| ||| || |||||||| || Sbjct 24555 TAGTTTCCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAG 24614 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||| | ||||| || || || | |||||| || ||||| ||||| | || ||||| Sbjct 24615 TCGCTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCT 24674 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 ||||| ||||| ||||||||||||||||| | |||||| ||||||||||||| ||| Sbjct 24675 GGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGAT 24734 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | ||||| || || || || || ||||||||||| || ||||| Sbjct 24735 TCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || |||||||| || ||||| Sbjct 24789 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 24848 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | |||| || || || | |||||| || ||||| || | | || ||||| |||||| Sbjct 24849 AAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGA 24908 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | |||||| || || ||||| | || || || Sbjct 24909 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 24968 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || ||||| ||||| ||||||||||| || ||||| Sbjct 24969 TCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | ||| || |||||||| || || ||||| || || ||| Sbjct 25017 CCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAG 25076 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| |||||||| ||||| | || || || || ||| Sbjct 25077 AGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGA 25136 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||| || ||||| ||||| | || || || Sbjct 25137 ATTCCTTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACC 25196 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 25197 TCGAGGGTGATGGTCTTGCCGGT 25219 >seq224 Length=177688 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||| || | ||||||||||| || || || | || | ||||| || || ||||| || Sbjct 19034 GTGCACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCA 19093 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || || | || ||||| |||||||| || |||||||| |||||||| |||| Sbjct 19094 GCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTG 19153 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || ||||||||||| | || || || || | ||||||||| || |||||||||||| Sbjct 19154 ACATTATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 19213 Query 68445 TTGACGAA 68452 |||||||| Sbjct 19214 TTGACGAA 19221 >seq2619 Length=45072 Score = 131 bits (144), Expect = 3e-25 Identities = 564/869 (65%), Gaps = 31/869 (4%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 30044 CATGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 29985 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || |||||| ||||||||| || || ||||| |||| | ||| | | || Sbjct 29984 TAGAGAAATGTTCTCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCC 29925 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 |||||| || | ||||| || || |||||||||||||||| ||| || | | || Sbjct 29924 GAGTGCCAACAACAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATT 29865 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | |||| || || | ||| || | || | || || || Sbjct 29864 CATGCCGAGGAGCATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGC 29805 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGAC-AGCTTGTTCTCGAGCTTCGAATACA 10233 ||| ||| |||||||| || | || | | | | ||||||||| ||| | || ||| Sbjct 29804 TTCAACGATGATGCTCTGCACGA-GTGATGCGTCTGGCTTGTTCTTGAGGTGAGAGAACA 29746 Query 10234 GGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAA 10292 | || | | || | ||| ||| | ||||||||| || ||| || || || || || Sbjct 29745 GCAGGCATGCGAAGT-CTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAGAAT 29687 Query 10293 CCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAG 10352 |||||||||||||| || || || || |||||| |||| ||| || || ||| Sbjct 29686 GTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCAGAG 29627 Query 10353 AACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA---GGAGCGGT 10407 | |||||| ||||| ||| | |||||| | || || || ||| | Sbjct 29626 A--AGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTCT 29569 Query 10408 CGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGG---CA-GGGATCGTC 10463 | || | || | | ||||| | |||||||| |||| || ||||| | Sbjct 29568 TGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTT----ACGGATACATGGGATGTTG 29513 Query 10464 TCGATAGCCTCGAAGAGCT-TGTT--ACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGG 10520 ||||| || | |||||| | || | ||| || ||| || | || | || | Sbjct 29512 TCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCG--CTGATGTAG-GTGTCGATA 29456 Query 10521 AGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CAT 10579 |||||||||||| || ||||| | |||| | |||| | ||||||| ||| Sbjct 29455 AGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCAT 29396 Query 10580 ACGTGCCGAGGG-GTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCA 10638 ||||| ||| || || ||||| || ||| | ||||||||| | || | Sbjct 29395 -CGTGCTTCGGGTATCTGT-ACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAA 29338 Query 10639 TGCCATC-GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCG 10697 | || || | || | || ||||| | |||| || |||||||| ||||| |||||| Sbjct 29337 TTCCGTCAGATG-CGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCG 29279 Query 10698 TTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAG 10757 |||||| | | |||||| | |||| | || | | |||||| |||||||| Sbjct 29278 TTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAG 29219 Query 10758 AAAGTGGCAACGGCCTTCTTGTACATCTG 10786 || | || ||||||||||||||||||| Sbjct 29218 AAGGATGCTTCGGCCTTCTTGTACATCTG 29190 >seq2223 Length=225719 Score = 84.2 bits (92), Expect = 4e-11 Identities = 196/310 (63%), Gaps = 53/310 (17%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || || ||| Sbjct 207996 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 207937 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | | || ||||| |||||| Sbjct 207936 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 207877 Query 68355 ATGCCTTCCTTGTCT--------------------------------------------- 68369 || || ||||||||| Sbjct 207876 ATTCCCTCCTTGTCTGCGCAAATGTTAGATGTGCTCGCGCGGCAATTCCAGCGGTGCGCG 207817 Query 68370 -----TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGA 68424 || || || | |||||| || |||||||| | || || || || | ||||| Sbjct 207816 TACCTTGGATTTTGGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCGAGGGTGA 207757 Query 68425 TGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTATACCCAAGTATTT 68484 | || || |||||||||||||||||||| |||||||| ||| | | |||||| || Sbjct 207756 TAGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCGTGC---TCTCCCCAAGGATGG 207700 Query 68485 TTATTCAAAC 68494 || ||||||| Sbjct 207699 TTCTTCAAAC 207690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921584025947320