Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2619 286 7e-72 seq1779 219 8e-52 >seq2619 Length=45072 Score = 286 bits (316), Expect = 7e-72 Identities = 579/845 (69%), Gaps = 16/845 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| | ||| ||||||||| ||||||||||| ||| |||||||| Sbjct 29193 ATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTGTCCAAGGAC 29252 Query 42369 ACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425 || |||| | | |||| || |||| | ||| || | | | || Sbjct 29253 CTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCACATGTCCTT 29312 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || ||||||||||| |||||||| || |||||||||||||||| | |||| Sbjct 29313 GCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCGCTTCAGCGGT 29372 Query 42486 GAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 || || ||| ||| || || || ||||||||||| |||||||| || |||||| | Sbjct 29373 GAAGTACAGATACCC-GAAGCACGATGCTTCTACGGATTCCAGATCATGATGGAGAACAT 29431 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||||| || ||| || || || |||| |||||| || ||| |||| Sbjct 29432 CCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAAGCAGCGATC 29491 Query 42605 CGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 || ||||| ||||| || | || || || ||| |||||||| |||||||| | Sbjct 29492 ATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGCTGACTGGGCATT 29551 Query 42665 CAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 |||||| | | || | | || || | | | || | ||||| | |||| Sbjct 29552 GCGATGGATCTCT-GACAAGAACTCGACTTTTGCCTGCCGATTGATCGCCTTCGCTGCCG 29610 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 ||||||||||||||||||| || | ||||| |||||||||||| | ||| || || Sbjct 29611 TCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCC 29670 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || |||||||| || || |||||||| ||| | ||| | |||||||| |||| | Sbjct 29671 TC-ATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGGGCATGCACACA 29729 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCGAAGGAGCGGGT 42901 ||||| || ||||| |||||||| ||||||| | ||||||| || | | | || Sbjct 29730 GACTTCGCATGCCTGCTGTTCTC---TCACCTCAAGAACAAGCCAGACGCATCA-CTCGT 29785 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | | ||||||| || || || | ||| ||| | || |||||||| | |||| || Sbjct 29786 GCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGCGCTCCC 29845 Query 42962 CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 || || |||||||||| | ||||||||| |||||||| ||| ||||| || Sbjct 29846 AGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCGGA 29905 Query 43022 CCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 || ||| || || || ||| |||| | |||||||| | | ||| ||||| | Sbjct 29906 CCGTCTGTTGTTGGCACTCGGGAATCAGAAG-TTCTACAACGCCACCAACCCATTCGATT 29964 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 | ||||||||||| || | | |||||||||||||| ||||||||||| || | |||| Sbjct 29965 TCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 30024 Query 43141 ACCAG 43145 ||||| Sbjct 30025 ACCAG 30029 >seq1779 Length=148467 Score = 219 bits (242), Expect = 8e-52 Identities = 1018/1585 (64%), Gaps = 67/1585 (4%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || ||| ||||| ||||| |||||| || || Sbjct 98438 GTTGACTACCTGGAACTCGCCAGCCAACACACGGCGAGAGTAGATGTTGCTAGTGTATGG 98379 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| || ||||| ||||| | ||| ||||||||||| || | ||| Sbjct 98378 CTCGAAGCACTCGTTGAAGCCCATGATCTGGGAAGTGGAAGCAGTCGGCATTGGAGCCAC 98319 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || || ||| | ||| |||||| | ||| | | |||| | ||| ||||| Sbjct 98318 GAGAAGGGAGTTTCGCACACCGTGCTCCGCGATCCTGGCCTTGAGAGCAGCCCAATCCCA 98259 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | || || | | || || |||||||| || | || || ||||| Sbjct 98258 GA-----GATCAGT--TGGAGT--GACACCCCACATATCGTATTGAAGTTCACCCTTTGA 98208 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389 || || ||| ||||||||| ||| || || || ||||||| |||| | | Sbjct 98207 CACTGGTGAGCCTTCGTAGGTCTCGTATGGGCCAAGCTTCTCAGCCAGCTCACAGGACGC 98148 Query 244390 -GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATC---ATCTTGTTCATGTCGCGGGCCT 244445 ||| ||| |||||| ||||||||| || || ||| || ||| | | |||| || Sbjct 98147 AGTCAAGG-CGGCGTGGTAGATGGTTTCAAAAATCTGGATATTGAGCCGG-CGCG---CT 98093 Query 244446 TGCCGCAG-GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 | | | || || |||||| |||| | | |||| | || || || ||||| || || Sbjct 98092 T-CAGGAGAGTCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCAAGACCCTGGACACC 98034 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 | |||||||| | ||| || |||| | || || ||||| ||||| ||| Sbjct 98033 AAGACCGATGGGGCGGTGACGGAAGTTGCTCTTTCTCGCCTCTGGCACTGGGTAGTGGTT 97974 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 | ||||| |||||| | || ||||| || | || || || ||| || Sbjct 97973 GATCTCGATGGTCTTGTTCAAATTCTTGGTGACCACCTGAACCACTTCATGAAGCTTCTT 97914 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTG--AGGGC 244680 |||||||| |||| || || | | || || | |||| || || Sbjct 97913 GAAGTCGTA--------GATC-TC----ATTCTCAATGTCGACGTAT--GTTGGCAGAGC 97869 Query 244681 GACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGT 244740 || || ||||||||||| |||||||| || | | ||||| || ||||| || Sbjct 97868 GATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCAGT 97809 Query 244741 GCAGAGGTTACTGCACTT--GATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAG 244798 |||||||||| | ||| ||| || || |||| || || ||| |||| |||||| Sbjct 97808 GCAGAGGTTA--GAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 97751 Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTC 244858 || |||||||| || ||||| || || |||||||| ||| || | || | | | | Sbjct 97750 GCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGGCATAC 97691 Query 244859 CAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTA 244917 |||| | | || || ||| ||| ||| | ||||| |||||| | ||| Sbjct 97690 CAGATCTTCTGGGCGCGAACAGTCTCGCG-GCCACGACCCTCCTTCTCGTACTGCTCGTA 97632 Query 244918 CAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACAT 244977 || |||||| || ||| | || || | || || |||||| ||||||||| Sbjct 97631 GAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACAT 97572 Query 244978 GAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037 ||| ||||||||||| |||| || | || |||||| || || |||||||| || || Sbjct 97571 GAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGC 97512 Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAA 245097 ||| ||||| | || | | ||| || |||| |||||| | || |||| || Sbjct 97511 GAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAA 97452 Query 245098 GTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTT 245157 | | || || ||||||| ||||| | ||| | || | ||| ||||| |||||||| Sbjct 97451 TGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTT 97392 Query 245158 GCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTA 245213 ||| ||||||| || | | ||||| |||| ||| ||||| |||| || | Sbjct 97391 GCCACCCTGGT----CAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCA 97336 Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGA 245273 ||||| || |||||| ||||| |||||| | ||| | | | || | | ||| Sbjct 97335 GTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATG-CGGTGA 97277 Query 245274 ---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGT 245330 | || | || | || || |||| ||||||||| | || || |||||| |||| Sbjct 97276 ACGTTGAGA--CCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGT 97219 Query 245331 CTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGG 245390 | || ||||| |||||||| |||||||| | || ||||| |||| ||||| | Sbjct 97218 CGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTG 97159 Query 245391 GCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGA 245450 || || | | | | | || || ||||| ||||| || ||||| | | || | Sbjct 97158 CATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACA 97099 Query 245451 GGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC- 245509 | | ||| |||| | ||| || |||| ||||||||||| | || ||| Sbjct 97098 TGTAGTTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGC-CACA 97040 Query 245510 CTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGG 245567 | ||||| | ||||| | ||| | || || | ||| | ||||| ||| | Sbjct 97039 CGCATGATCATTTGCTGCG--GTCGCTCTGCAACCTTGCCGTCAATGCGGAGCAGGTACG 96982 Query 245568 AGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGG 245627 | ||||| | ||||||||| ||||||||| |||| ||||| || | | || Sbjct 96981 ATCGCTCCAACGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGG 96922 Query 245628 CTGCGTCGAGTCTC-TCGGCGTGCT 245651 ||| || ||| ||| |||||||||| Sbjct 96921 CTGAGTTGAG-CTCATCGGCGTGCT 96898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944299880076560