Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 102 2e-16
seq1113 93.3 9e-14
>seq2619
Length=45072
Score = 102 bits (112), Expect = 2e-16
Identities = 554/874 (63%), Gaps = 29/874 (3%)
Strand=Plus/Plus
Query 242896 ATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTTCCTCTG 242955
|| ||| | ||||| |||||||| | ||| |||| |||||| | ||||| || ||||
Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243
Query 242956 AACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 243015
| ||| | ||||||| | ||| ||| || || ||||| || | |||||| |
Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303
Query 243016 CACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGCA-GACCAA 243074
|| | || | ||| ||||| | || || || ||||| | || || ||| || |
Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCG- 29362
Query 243075 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 243134
||| || | |||||| | | || || ||||| || || | | ||| | | |
Sbjct 29363 CTTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 29422
Query 243135 CGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGACGCGCTTATTTCAGATGAAC- 243193
|| ||||| || ||| ||| | || ||||||||| | || |||| ||||
Sbjct 29423 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACC--TACATCAGC-GAACC 29479
Query 243194 -AAG-AGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGC 243251
||| ||||| | || ||| |||||||||| ||||| || | | ||| |||||
Sbjct 29480 CAAGCAGCGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGC 29539
Query 243252 AAAATGGGC--TCAGAAG------TGGCTAGAACCCGGTAAATCATTTGCTGAGCGTCTC 243303
| ||||| | || | || | ||||| || | ||||| || |
Sbjct 29540 TGACTGGGCATTGCGATGGATCTCTGACAAGAACTCGA-----CTTTTGCCTGCCGATTG 29594
Query 243304 GTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGG 243363
|||||| | ||| || || || | || || || |||| ||||||| |||
Sbjct 29595 ATCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGG 29654
Query 243364 CTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGAC 243423
|| ||| || | ||||| || || | || || || || ||| || |||
Sbjct 29655 TTGAAGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGAC 29714
Query 243424 GAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCA 243483
|||||| | ||| | | |||| || ||| || | ||| ||||||||| ||
Sbjct 29715 GAGGGCATGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAGAACAAGC---CA 29771
Query 243484 TTCGAAACGGTCAAACAAATCATCACAG---AAGCAGTTGAAAACGAAAAGGAATTCATT 243540
|| | | || || | ||||| | |||| |||| | || | |||||| |
Sbjct 29772 GACGCATCACTCGTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTC 29831
Query 243541 TGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATC 243600
|| || | ||| | ||| | |||||||| || | |||||| | |||||||||
Sbjct 29832 ACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATC 29891
Query 243601 GAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAG 243660
|| || || || ||||| | || | || || || || |||| | |||||| |||
Sbjct 29892 GAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAATCAGAAGTTCTACAACGCCACC 29951
Query 243661 AACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720
||||| || | || |||||| |||||| || || || || ||||||||||| |||
Sbjct 29952 AACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAG 30011
Query 243721 CGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
||||| |||| || || | | || ||||| |||
Sbjct 30012 CGTGTTGGTGACTACCAGAAGGCC-GGTGTCATG 30044
>seq1113
Length=209381
Score = 93.3 bits (102), Expect = 9e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 333858 TTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCG 333917
||||||||||| || |||||| | ||||| |||| | |||||||| ||||||
Sbjct 24664 TTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACATCCAAGTGGTTGGTTGGCTCG 24723
Query 333918 TCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTC 333977
|||||||| || | | || ||| || | |||||| ||||| ||||| ||||| |||
Sbjct 24724 TCAAGAAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTTC 24783
Query 333978 CACCCTCCTGAAAGAG 333993
||||| || |||||||
Sbjct 24784 CACCCACCAGAAAGAG 24799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102832930804850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |