Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2619 102 2e-16 seq1113 93.3 9e-14 >seq2619 Length=45072 Score = 102 bits (112), Expect = 2e-16 Identities = 554/874 (63%), Gaps = 29/874 (3%) Strand=Plus/Plus Query 242896 ATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTTCCTCTG 242955 || ||| | ||||| |||||||| | ||| |||| |||||| | ||||| || |||| Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243 Query 242956 AACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 243015 | ||| | ||||||| | ||| ||| || || ||||| || | |||||| | Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303 Query 243016 CACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGCA-GACCAA 243074 || | || | ||| ||||| | || || || ||||| | || || ||| || | Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCG- 29362 Query 243075 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 243134 ||| || | |||||| | | || || ||||| || || | | ||| | | | Sbjct 29363 CTTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 29422 Query 243135 CGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGACGCGCTTATTTCAGATGAAC- 243193 || ||||| || ||| ||| | || ||||||||| | || |||| |||| Sbjct 29423 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACC--TACATCAGC-GAACC 29479 Query 243194 -AAG-AGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGC 243251 ||| ||||| | || ||| |||||||||| ||||| || | | ||| ||||| Sbjct 29480 CAAGCAGCGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAGGC 29539 Query 243252 AAAATGGGC--TCAGAAG------TGGCTAGAACCCGGTAAATCATTTGCTGAGCGTCTC 243303 | ||||| | || | || | ||||| || | ||||| || | Sbjct 29540 TGACTGGGCATTGCGATGGATCTCTGACAAGAACTCGA-----CTTTTGCCTGCCGATTG 29594 Query 243304 GTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGG 243363 |||||| | ||| || || || | || || || |||| ||||||| ||| Sbjct 29595 ATCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGG 29654 Query 243364 CTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGAC 243423 || ||| || | ||||| || || | || || || || ||| || ||| Sbjct 29655 TTGAAGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGAC 29714 Query 243424 GAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCA 243483 |||||| | ||| | | |||| || ||| || | ||| ||||||||| || Sbjct 29715 GAGGGCATGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAGAACAAGC---CA 29771 Query 243484 TTCGAAACGGTCAAACAAATCATCACAG---AAGCAGTTGAAAACGAAAAGGAATTCATT 243540 || | | || || | ||||| | |||| |||| | || | |||||| | Sbjct 29772 GACGCATCACTCGTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTC 29831 Query 243541 TGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATC 243600 || || | ||| | ||| | |||||||| || | |||||| | ||||||||| Sbjct 29832 ACAGATGCGCTCCCAGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATC 29891 Query 243601 GAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAG 243660 || || || || ||||| | || | || || || || |||| | |||||| ||| Sbjct 29892 GAGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAATCAGAAGTTCTACAACGCCACC 29951 Query 243661 AACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720 ||||| || | || |||||| |||||| || || || || ||||||||||| ||| Sbjct 29952 AACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAG 30011 Query 243721 CGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 ||||| |||| || || | | || ||||| ||| Sbjct 30012 CGTGTTGGTGACTACCAGAAGGCC-GGTGTCATG 30044 >seq1113 Length=209381 Score = 93.3 bits (102), Expect = 9e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 333858 TTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCG 333917 ||||||||||| || |||||| | ||||| |||| | |||||||| |||||| Sbjct 24664 TTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACATCCAAGTGGTTGGTTGGCTCG 24723 Query 333918 TCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTC 333977 |||||||| || | | || ||| || | |||||| ||||| ||||| ||||| ||| Sbjct 24724 TCAAGAAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTTC 24783 Query 333978 CACCCTCCTGAAAGAG 333993 ||||| || ||||||| Sbjct 24784 CACCCACCAGAAAGAG 24799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102832930804850