Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 132 5e-26
seq224 98.7 1e-15
>seq1001
Length=158095
Score = 132 bits (146), Expect = 5e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| ||||||||||| || || ||||| || || ||||| |
Sbjct 24572 ACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCC 24631
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| |||||||| ||||| ||||||||||| | ||| | || ||||||
Sbjct 24632 GTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTT 24691
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|| | ||| | || | |||| | | | ||||| |||||||| || | ||||
Sbjct 24692 GT-CTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCCACTTCTAGTGTGA 24750
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| || |||||||||||
Sbjct 24751 TAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || ||||| |||| || |||||||| ||||||||
Sbjct 24824 CTCCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 24883
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | ||||||||||| | ||| | | ||||||||| ||| || |||| |
Sbjct 24884 GATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATT 24943
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| || || || |||| ||||| || || || || |||||||| ||
Sbjct 24944 GTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGAC 25003
Query 42197 AAAGATTTGCAT 42208
|||||||||||
Sbjct 25004 GAAGATTTGCAT 25015
>seq224
Length=177688
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070
||||| | ||||||| || ||||| |||| || ||| || | || || | ||||| ||
Sbjct 19033 TGTGCACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCC 19092
Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-T 42129
|||||| || || ||||||||||| | ||| | | |||||||||| ||| | || | |
Sbjct 19093 AGCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCC-TGAATCTTGCTCT 19151
Query 42130 TGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 42189
||| | | | |||||| || || || || | |||||||| |||||||| || |
Sbjct 19152 TGACATTATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGG 19211
Query 42190 TCTTTACAAAG 42200
|||| || |||
Sbjct 19212 TCTTGACGAAG 19222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543190181977040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |