Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 105 7e-18
>seq1001
Length=158095
Score = 105 bits (116), Expect = 7e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | || || || || | || || || || ||||||||||| || |
Sbjct 25016 ACCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 25075
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || || ||||||||||| ||||||| |||||||| || |||||
Sbjct 25076 GAGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGG 25135
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||| ||| || | || || || || ||
Sbjct 25136 AATTCCTTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAAC 25195
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421
|| | || | ||||||||||||||
Sbjct 25196 CTCGAGGGTGATGGTCTTGCCGGTCA 25221
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | || || |||| |||||||||||||| || |
Sbjct 24597 TCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 24656
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| ||||||||||| || || || || || || ||||| || || ||| |||
Sbjct 24657 ATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTG 24716
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | |||||||||| || | ||||||||||| | || || |||
Sbjct 24717 TCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACG 24776
Query 64433 AAAATTTGCAT 64443
|| ||||||||
Sbjct 24777 AAGATTTGCAT 24787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499623996039640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |