Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1779 232 7e-56 >seq1779 Length=148467 Score = 232 bits (256), Expect = 7e-56 Identities = 604/916 (66%), Gaps = 4/916 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || ||||| |||||||| ||| || || ||| Sbjct 96945 AACTACCAGTACTTTGGCTTCAAGACGTTGGAGCGATCGTACCTGCTCCGCATTGACGGC 97004 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||||||||||| || || | ||||| || || | || || |||||| | Sbjct 97005 AAGGTTGCAGAGCGACCGCAGCAAATGATCATGCGTGTGGCTGTTGGTATCCACGGCGAG 97064 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | || | | | | | || ||||| ||||| | || || Sbjct 97065 GACATTGAGGCTGCTATTGAGACCTACAACTACATGTCCAACAAGTACTTCACACACGCG 97124 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || || | ||| || || || ||||| | | || || ||| || | Sbjct 97125 TCGCCCACGCTTTTTAGCGCTGGTACGCCTAATGCACAGCTCGCCTCATGCTTCTTGGTT 97184 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| |||| ||| || || | ||||| |||||| ||||| | || Sbjct 97185 GAC-ATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTCAAGACTTGTGCTATGAT 97243 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || |||| || || || || ||| || ||| | | ||||| | || || || Sbjct 97244 CTCCAAGAACGCTGGAGGCATTGGTCTCAACGTTCACCGCATCCGTGCGACTGGCTCGTA 97303 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| | || || || ||||| |||||||| || || |||||||| || |||| |||||| Sbjct 97304 CATCGGAGGCACGAACGGCACGTCCAACGGACTGGTTCCTATGCTGCGTGTCTACAACAA 97363 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| | || || | || || Sbjct 97364 CACTGCTCGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCT 97423 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| |||||||| || || | ||| ||||| || || || |||||||| ||||| || Sbjct 97424 CGAGCCATGGCACGCTGATGTTCTGGCATTCATGGATCTCCGCAAGAACCATGGCAAAGA 97483 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | | ||| | ||||| |||| ||| || ||| | || || || || ||||| || Sbjct 97484 GGAGGTGCGCGCCCGCGACCTTTTCTTCGCACTTTGGATCCCGGATCTGTTCATGAAGCG 97543 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||| | ||| || |||| || | || || ||||| || || || || | || Sbjct 97544 TGTTGAGGAGAACGGCGAGTGGACCCTCATGTGCCCGAATGAGTGCCCTGGTCTCGCAGA 97603 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432 |||| ||| | || || | | || | | ||||| | |||| | |||| Sbjct 97604 TGTTTATGGCGAGGACTTCGAGAAGCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGCC- 97662 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || | | || |||| | ||| || || | || | ||| |||||| | Sbjct 97663 GCGAGACTGTTCGCGCCCAGAAGATCTGGTATGCCATTCTTGAGGCTCAGACGGAGACCG 97722 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | || | |||| | | |||||| || |||| |||| ||||||| || |||| | Sbjct 97723 GCGGCCCTTTCATCCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTG 97782 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| || || || || ||||| ||||| ||||||| || |||| || ||| Sbjct 97783 GTACAATCCGCAGTTCTAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCAGATGAGG 97842 Query 94613 TTGCTGTGTGTAACCT 94628 | ||||| || ||||| Sbjct 97843 TGGCTGTCTGCAACCT 97858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494702600962760