Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 232 7e-56
>seq1779
Length=148467
Score = 232 bits (256), Expect = 7e-56
Identities = 604/916 (66%), Gaps = 4/916 (0%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || ||||| |||||||| ||| || || |||
Sbjct 96945 AACTACCAGTACTTTGGCTTCAAGACGTTGGAGCGATCGTACCTGCTCCGCATTGACGGC 97004
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||||||||||| || || | ||||| || || | || || |||||| |
Sbjct 97005 AAGGTTGCAGAGCGACCGCAGCAAATGATCATGCGTGTGGCTGTTGGTATCCACGGCGAG 97064
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | || | | | | | || ||||| ||||| | || ||
Sbjct 97065 GACATTGAGGCTGCTATTGAGACCTACAACTACATGTCCAACAAGTACTTCACACACGCG 97124
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || || | ||| || || || ||||| | | || || ||| || |
Sbjct 97125 TCGCCCACGCTTTTTAGCGCTGGTACGCCTAATGCACAGCTCGCCTCATGCTTCTTGGTT 97184
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| |||| ||| || || | ||||| |||||| ||||| | ||
Sbjct 97185 GAC-ATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTCAAGACTTGTGCTATGAT 97243
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || |||| || || || || ||| || ||| | | ||||| | || || ||
Sbjct 97244 CTCCAAGAACGCTGGAGGCATTGGTCTCAACGTTCACCGCATCCGTGCGACTGGCTCGTA 97303
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|||| | || || || ||||| |||||||| || || |||||||| || |||| ||||||
Sbjct 97304 CATCGGAGGCACGAACGGCACGTCCAACGGACTGGTTCCTATGCTGCGTGTCTACAACAA 97363
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| | || || | || ||
Sbjct 97364 CACTGCTCGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCT 97423
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|||||| |||||||| || || | ||| ||||| || || || |||||||| ||||| ||
Sbjct 97424 CGAGCCATGGCACGCTGATGTTCTGGCATTCATGGATCTCCGCAAGAACCATGGCAAAGA 97483
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | | ||| | ||||| |||| ||| || ||| | || || || || ||||| ||
Sbjct 97484 GGAGGTGCGCGCCCGCGACCTTTTCTTCGCACTTTGGATCCCGGATCTGTTCATGAAGCG 97543
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||| | ||| || |||| || | || || ||||| || || || || | ||
Sbjct 97544 TGTTGAGGAGAACGGCGAGTGGACCCTCATGTGCCCGAATGAGTGCCCTGGTCTCGCAGA 97603
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432
|||| ||| | || || | | || | | ||||| | |||| | ||||
Sbjct 97604 TGTTTATGGCGAGGACTTCGAGAAGCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGCC- 97662
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| || | | || |||| | ||| || || | || | ||| |||||| |
Sbjct 97663 GCGAGACTGTTCGCGCCCAGAAGATCTGGTATGCCATTCTTGAGGCTCAGACGGAGACCG 97722
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| || | |||| | | |||||| || |||| |||| ||||||| || |||| |
Sbjct 97723 GCGGCCCTTTCATCCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTG 97782
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| || || || || ||||| ||||| ||||||| || |||| || |||
Sbjct 97783 GTACAATCCGCAGTTCTAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCAGATGAGG 97842
Query 94613 TTGCTGTGTGTAACCT 94628
| ||||| || |||||
Sbjct 97843 TGGCTGTCTGCAACCT 97858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494702600962760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |