Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq224 86.0 6e-12 >seq224 Length=177688 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||||||| ||||| ||| | |||| || ||||||||||| ||||| || || || Sbjct 19075 ATCCTCCAATTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTT 19134 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || ||||| || |||| || | ||||||||| |||||||| || || || | Sbjct 19135 GTCCTGAATCTTGCTCTTGACATTATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGAT 19194 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAA 45331 || ||||| || || || || || || Sbjct 19195 GGTCTTGCCCGTGAGGGTCTTGACGAA 19221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451984379716760