Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 179 6e-40
seq1779 87.8 3e-12
>seq2619
Length=45072
Score = 179 bits (198), Expect = 6e-40
Identities = 524/800 (66%), Gaps = 13/800 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||||| ||||||||||
Sbjct 30011 CTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCCATGAAATCGAATGGGTT 29952
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| || ||||| ||| || || | ||| || ||||| ||
Sbjct 29951 GGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAACAGACGGTCCGCGACAAACTC 29892
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| | || || || || ||| | || |||||||| || |
Sbjct 29891 GATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGCATGACTGGGAGCGCATCTGT 29832
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTT---CGGTCACAATCTGCGAGACACGTTCGTA 159885
|| || || | ||||||| | || |||| || | | ||||| || | |||
Sbjct 29831 GAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATGCTCTGCACGAGTGATGCGT- 29773
Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
| |||||| | || ||| ||||| ||||| || ||||| ||||| ||
Sbjct 29772 --CTGGCTTGTTC---TTGAGGTGAGAGAACAGCAGGCATGCGAAGTCTGTGTGCATGCC 29718
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
|||||| || ||||| || || || || | | || || ||||||| |||||| ||
Sbjct 29717 CTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTT 29658
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
| ||| || |||| || |||| ||| || ||||| ||||| ||||| || || ||
Sbjct 29657 CAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGC 29598
Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125
| | | |||||| | ||| ||||| | |||| | ||||| |||||
Sbjct 29597 GATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC 29538
Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCA 160184
|||||| ||| || || ||| |||| |||||| || | || || | ||| |||
Sbjct 29537 CTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATC-GCTGCTTGG 29479
Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244
|| |||| || | || ||| ||||| |||| | ||| | || || ||
Sbjct 29478 GTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCA 29419
Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTT 160304
||||| || |||||| || || || | ||| || || |||| | |
Sbjct 29418 TGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCT 29359
Query 160305 GACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGA 160364
| |||| || |||| || | ||||| | || || |||||||| | || || ||||
Sbjct 29358 CAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGA 29299
Query 160365 TGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAA 160423
|||| | || |||||| | ||| |||||||| | ||||| ||| | ||| | || || |
Sbjct 29298 TGAAGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTG-AAGGTCCTTGGACAGA 29240
Query 160424 TCAACCTCTTCCGCGCTCCA 160443
|||| ||| || ||| ||||
Sbjct 29239 TCAATCTCCTCAGCGGTCCA 29220
>seq1779
Length=148467
Score = 87.8 bits (96), Expect = 3e-12
Identities = 346/533 (65%), Gaps = 10/533 (2%)
Strand=Plus/Minus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|| ||| ||||| || |||||| || || | || || || ||||| | | | ||
Sbjct 97541 CTTCATGAACAGATCCGGGATCCAAAGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTC 97482
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284
| ||| ||||||| | |||| | ||| || || |||||||| ||||| |
Sbjct 97481 TTTGCCATGGTTCTTGCGGAGATCCATGAATGCCAGAACATCAGCGTGCCATGGCTCGAG 97422
Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344
| | ||| | || || || | |||||| ||||||||||| || ||||| |
Sbjct 97421 GTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTT 97362
Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404
|||| | || |||||||| || ||||| ||||||| || |||||||||| ||||
Sbjct 97361 GTTGTAGACACGCAGCATAGGAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTA 97302
Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGA 205463
|||||| || | | | || || | | | ||||| || |||| ||||| ||
Sbjct 97301 CGAGCCAGTCGCACGGATG-CGGTGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGA 97243
Query 205464 TCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522
|| || | | ||||| |||||| |||||| || | ||| |||||| || ||||
Sbjct 97242 TCATAGCACAAGTCTTG-AGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCA-TGTC 97185
Query 205523 -ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
|||| |||| || || |||| ||| || || ||| || ||||||||
Sbjct 97184 AACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGA 97125
Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTC--CAGCACGCTCTCCAGA 205639
||||| ||||| ||| | | || | |||||||||| |||| || ||| |
Sbjct 97124 CGCGTGTGTGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCA-GC-CTCAATG 97067
Query 205640 TCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692
|| |||||| ||||| | || | | ||||| | || || |||| |||
Sbjct 97066 TCCTCGCCGTGGATACCAACAGCCACACGCATGATCATTTGCTGCGGTCGCTC 97014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795122091725360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |