Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2619 179 6e-40 seq1779 87.8 3e-12 >seq2619 Length=45072 Score = 179 bits (198), Expect = 6e-40 Identities = 524/800 (66%), Gaps = 13/800 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||||||||| Sbjct 30011 CTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCCATGAAATCGAATGGGTT 29952 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| || ||||| ||| || || | ||| || ||||| || Sbjct 29951 GGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAACAACAGACGGTCCGCGACAAACTC 29892 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| ||| | || || || || ||| | || |||||||| || | Sbjct 29891 GATGTACTGGCACATGAGCTTAGCATTCATGCCGAGGAGCATGACTGGGAGCGCATCTGT 29832 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTT---CGGTCACAATCTGCGAGACACGTTCGTA 159885 || || || | ||||||| | || |||| || | | ||||| || | ||| Sbjct 29831 GAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATGCTCTGCACGAGTGATGCGT- 29773 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | |||||| | || ||| ||||| ||||| || ||||| ||||| || Sbjct 29772 --CTGGCTTGTTC---TTGAGGTGAGAGAACAGCAGGCATGCGAAGTCTGTGTGCATGCC 29718 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||| || || || || | | || || ||||||| |||||| || Sbjct 29717 CTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTT 29658 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 | ||| || |||| || |||| ||| || ||||| ||||| ||||| || || || Sbjct 29657 CAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGC 29598 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | | | |||||| | ||| ||||| | |||| | ||||| ||||| Sbjct 29597 GATCAATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC 29538 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCA 160184 |||||| ||| || || ||| |||| |||||| || | || || | ||| ||| Sbjct 29537 CTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATC-GCTGCTTGG 29479 Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244 || |||| || | || ||| ||||| |||| | ||| | || || || Sbjct 29478 GTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCA 29419 Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTT 160304 ||||| || |||||| || || || | ||| || || |||| | | Sbjct 29418 TGATCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCT 29359 Query 160305 GACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGA 160364 | |||| || |||| || | ||||| | || || |||||||| | || || |||| Sbjct 29358 CAACCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGA 29299 Query 160365 TGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAA 160423 |||| | || |||||| | ||| |||||||| | ||||| ||| | ||| | || || | Sbjct 29298 TGAAGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTG-AAGGTCCTTGGACAGA 29240 Query 160424 TCAACCTCTTCCGCGCTCCA 160443 |||| ||| || ||| |||| Sbjct 29239 TCAATCTCCTCAGCGGTCCA 29220 >seq1779 Length=148467 Score = 87.8 bits (96), Expect = 3e-12 Identities = 346/533 (65%), Gaps = 10/533 (2%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| ||||| || |||||| || || | || || || ||||| | | | || Sbjct 97541 CTTCATGAACAGATCCGGGATCCAAAGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTC 97482 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284 | ||| ||||||| | |||| | ||| || || |||||||| ||||| | Sbjct 97481 TTTGCCATGGTTCTTGCGGAGATCCATGAATGCCAGAACATCAGCGTGCCATGGCTCGAG 97422 Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344 | | ||| | || || || | |||||| ||||||||||| || ||||| | Sbjct 97421 GTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTT 97362 Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404 |||| | || |||||||| || ||||| ||||||| || |||||||||| |||| Sbjct 97361 GTTGTAGACACGCAGCATAGGAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTA 97302 Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGA 205463 |||||| || | | | || || | | | ||||| || |||| ||||| || Sbjct 97301 CGAGCCAGTCGCACGGATG-CGGTGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGA 97243 Query 205464 TCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 || || | | ||||| |||||| |||||| || | ||| |||||| || |||| Sbjct 97242 TCATAGCACAAGTCTTG-AGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCA-TGTC 97185 Query 205523 -ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 |||| |||| || || |||| ||| || || ||| || |||||||| Sbjct 97184 AACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGA 97125 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTC--CAGCACGCTCTCCAGA 205639 ||||| ||||| ||| | | || | |||||||||| |||| || ||| | Sbjct 97124 CGCGTGTGTGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCA-GC-CTCAATG 97067 Query 205640 TCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692 || |||||| ||||| | || | | ||||| | || || |||| ||| Sbjct 97066 TCCTCGCCGTGGATACCAACAGCCACACGCATGATCATTTGCTGCGGTCGCTC 97014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795122091725360