Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 239 5e-58
seq1001 107 2e-18
seq224 104 2e-17
>seq2619
Length=45072
Score = 239 bits (264), Expect = 5e-58
Identities = 551/823 (67%), Gaps = 13/823 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | |||||| | ||| ||||| || ||||||
Sbjct 30010 TTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCCATGAAATCGAATGGGTTG 29951
Query 132685 GCTGTGTTGTAGTGCTT--GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742
| | ||||||| ||| | | || || | | | ||| | ||| || || ||||
Sbjct 29950 GTGGCGTTGTAGAACTTCTGATTCCCG--AGTGCCAACAACAGACGGTCCGCGACAAACT 29893
Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801
||||||| || ||||| | || ||| | | | || || || || || ||||| ||
Sbjct 29892 CGATGTACTGGCACATGAGCTTAGCATTCATG-CCGAGGAGCATGACTGGGAGCGCATCT 29834
Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861
||||| || |||||| || || || || || || ||| | ||| | | |||
Sbjct 29833 GTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATGCTCTGCACGAGTGATGCG 29774
Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921
||| | | | || ||||| || ||| || ||||| |||| |||||||
Sbjct 29773 TCTGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCG 29714
Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981
|| | || || | ||| || ||| || | |||||||||||||| || || || | |
Sbjct 29713 TCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAAC 29654
Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041
|| || |||| |||||| || || ||||||| |||||||||||| ||||| || | |
Sbjct 29653 CAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATC 29594
Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101
| || | | || || | | ||| | |||||| |||| ||||| || |||||
Sbjct 29593 AATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTC 29534
Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA 133161
| || || || || | ||||||||||| || | | | || || | ||
Sbjct 29533 TTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT--ATGATCGCTGCTTGGGTT 29476
Query 133162 CGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219
||| | |||||||||||| || || || |||||||||| | ||||||||| ||
Sbjct 29475 CGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGA 29416
Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGA 133279
| || || ||||| ||||| || || ||| | ||| ||||| ||| ||||| |
Sbjct 29415 TCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAA 29356
Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339
|||| || || ||||| || ||||| |||||||| || || || || || |||||
Sbjct 29355 CCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGA 29296
Query 133340 AATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396
| | ||||||| ||||||| | | | ||||||| | |||||||||||| || |
Sbjct 29295 AGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAA 29236
Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|||||| ||||||| || || || ||||| || ||||||||
Sbjct 29235 TCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTACAT 29193
>seq1001
Length=158095
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || || || | |
Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | ||||| ||||| || || | |||||
Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| ||||| ||||| || |||| || || | | ||||||||||
Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACTACAAC 24608
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||| || ||||| |||||||| ||| || | || ||
Sbjct 24607 ATCCAGAAGGAGAGC-ACTCTGCACTTGGTGCTCCGTCTGCGTGGTGG 24561
Score = 105 bits (116), Expect = 7e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || |||||||| || || || |||||| |||| || ||| | ||
Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| ||||| || |||| || ||| | ||||||||||
Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836
Query 38424 ATCCAAAAGGA 38434
||||| |||||
Sbjct 24835 ATCCAGAAGGA 24825
Score = 93.3 bits (102), Expect = 4e-14
Identities = 124/169 (73%), Gaps = 4/169 (2%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| ||||||||| |||| || ||| || |||||| | | || | | ||||
Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATG--TGAAGA 25162
Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| || |||||||| | || || ||||| ||||||| ||| ||||
Sbjct 25161 GCAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCA 25102
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
| || || || || | ||||| ||| ||||||||||| || |||||
Sbjct 25101 AGCAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGA 25053
>seq224
Length=177688
Score = 104 bits (114), Expect = 2e-17
Identities = 135/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| | || |||||| || |||||| | |
Sbjct 19221 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 19162
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| || | | |||| || || | ||||| ||||||||||| | ||||| ||||| |
Sbjct 19161 GATAATG--TCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTC 19104
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| || || || |||| || | ||||| | ||||||||||||||||
Sbjct 19103 TGATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAA 19044
Query 38431 AGG 38433
|||
Sbjct 19043 AGG 19041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500151974055040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |