Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2619 239 5e-58 seq1001 107 2e-18 seq224 104 2e-17 >seq2619 Length=45072 Score = 239 bits (264), Expect = 5e-58 Identities = 551/823 (67%), Gaps = 13/823 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | |||||| | ||| ||||| || |||||| Sbjct 30010 TTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATGTTCTCCATGAAATCGAATGGGTTG 29951 Query 132685 GCTGTGTTGTAGTGCTT--GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 | | ||||||| ||| | | || || | | | ||| | ||| || || |||| Sbjct 29950 GTGGCGTTGTAGAACTTCTGATTCCCG--AGTGCCAACAACAGACGGTCCGCGACAAACT 29893 Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801 ||||||| || ||||| | || ||| | | | || || || || || ||||| || Sbjct 29892 CGATGTACTGGCACATGAGCTTAGCATTCATG-CCGAGGAGCATGACTGGGAGCGCATCT 29834 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 ||||| || |||||| || || || || || || ||| | ||| | | ||| Sbjct 29833 GTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATGATGCTCTGCACGAGTGATGCG 29774 Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 ||| | | | || ||||| || ||| || ||||| |||| ||||||| Sbjct 29773 TCTGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCG 29714 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || || | ||| || ||| || | |||||||||||||| || || || | | Sbjct 29713 TCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAAC 29654 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || |||| |||||| || || ||||||| |||||||||||| ||||| || | | Sbjct 29653 CAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATC 29594 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 | || | | || || | | ||| | |||||| |||| ||||| || ||||| Sbjct 29593 AATCGGCAGGCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTC 29534 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA 133161 | || || || || | ||||||||||| || | | | || || | || Sbjct 29533 TTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGAT--ATGATCGCTGCTTGGGTT 29476 Query 133162 CGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219 ||| | |||||||||||| || || || |||||||||| | ||||||||| || Sbjct 29475 CGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGA 29416 Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGA 133279 | || || ||||| ||||| || || ||| | ||| ||||| ||| ||||| | Sbjct 29415 TCTGGAATCCGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAA 29356 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 |||| || || ||||| || ||||| |||||||| || || || || || ||||| Sbjct 29355 CCAGGTTCTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGA 29296 Query 133340 AATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | | ||||||| ||||||| | | | ||||||| | |||||||||||| || | Sbjct 29295 AGTATCGCTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAA 29236 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||||| ||||||| || || || ||||| || |||||||| Sbjct 29235 TCTCCTCAGCGGTCCAGAAGGATGCTTCGGCCTTCTTGTACAT 29193 >seq1001 Length=158095 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| | || || || | | Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || || | ||||| ||||| || || | ||||| Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || |||| || || | | |||||||||| Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACTACAAC 24608 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || ||||| |||||||| ||| || | || || Sbjct 24607 ATCCAGAAGGAGAGC-ACTCTGCACTTGGTGCTCCGTCTGCGTGGTGG 24561 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || |||||||| || || || |||||| |||| || ||| | || Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| ||||| ||||| | ||||| Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| ||||| ||||| || |||| || ||| | |||||||||| Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 24835 ATCCAGAAGGA 24825 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| || ||| || |||||| | | || | | |||| Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATG--TGAAGA 25162 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| || |||||||| | || || ||||| ||||||| ||| |||| Sbjct 25161 GCAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCA 25102 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 | || || || || | ||||| ||| ||||||||||| || ||||| Sbjct 25101 AGCAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGA 25053 >seq224 Length=177688 Score = 104 bits (114), Expect = 2e-17 Identities = 135/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || |||||| || |||||| | | Sbjct 19221 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 19162 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || || | ||||| ||||||||||| | ||||| ||||| | Sbjct 19161 GATAATG--TCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTC 19104 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || || |||| || | ||||| | |||||||||||||||| Sbjct 19103 TGATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAA 19044 Query 38431 AGG 38433 ||| Sbjct 19043 AGG 19041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500151974055040