Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1446 93.3 3e-13 seq2641 91.5 1e-12 >seq1446 Length=151459 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719 || || |||||||| | |||| ||||||||||||| ||||| | || ||| | || ||| Sbjct 26078 GAGTTCTTCTTCCACGCTATGGGAGGTCGTGAAGGTCTTATTGACACCGCTGTCAAGACT 26019 Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCA--AACAAG 671777 ||||| |||||||| ||||| | ||| || ||| ||||||||| |||| | |||| Sbjct 26018 GCTGAGACTGGTTACATTCAGCGTCGACTCGTCAAAGCGCTCGAAGAAATCATGATCAAG 25959 Query 671778 AATATGATGGTACAGTAAGAAA 671799 || ||||| || || |||| Sbjct 25958 --TACGATGGCACCGTGCGAAA 25939 >seq2641 Length=38183 Score = 91.5 bits (100), Expect = 1e-12 Identities = 191/283 (67%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || ||||| || || || ||||| | ||| | ||||| || | | ||| Sbjct 32057 ACGAGACGGTTGTCAAAGTCCTCTCCACCCAAATGAGTGTCTCCTGCAGTCGACTTCACT 32116 Query 518075 TGGAAAAGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132 | ||| | || || || | | || || || ||||| || || ||||||| || Sbjct 32117 TCGAAGATGCCCTCCTCGATTGTGAGCAATGAA--ACATCGAAAGTGCCGCCACCCAAAT 32174 Query 518133 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 518192 | ||||| || || || || || || ||||||||||| || |||| |||| Sbjct 32175 CGAAAATGAGGACGTTGCGCTCGCCCTCGGTCTTCTTATCAAGACCGTAGGCAATGGCAG 32234 Query 518193 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 518252 | || ||||| || || || || | | || || || || ||||| || ||||| | Sbjct 32235 CTGCGGTTGGCTCGTTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCATCCT 32294 Query 518253 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 | || ||||||| || || ||||| || ||||| |||||||| Sbjct 32295 TGGTTGCTTGTCGCTGCGAGTCGTTGAAGTATGCCGGAACAGT 32337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780657104807686