Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1446 93.3 3e-13
seq2641 91.5 1e-12
>seq1446
Length=151459
Score = 93.3 bits (102), Expect = 3e-13
Identities = 107/142 (75%), Gaps = 4/142 (3%)
Strand=Plus/Minus
Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719
|| || |||||||| | |||| ||||||||||||| ||||| | || ||| | || |||
Sbjct 26078 GAGTTCTTCTTCCACGCTATGGGAGGTCGTGAAGGTCTTATTGACACCGCTGTCAAGACT 26019
Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCA--AACAAG 671777
||||| |||||||| ||||| | ||| || ||| ||||||||| |||| | ||||
Sbjct 26018 GCTGAGACTGGTTACATTCAGCGTCGACTCGTCAAAGCGCTCGAAGAAATCATGATCAAG 25959
Query 671778 AATATGATGGTACAGTAAGAAA 671799
|| ||||| || || ||||
Sbjct 25958 --TACGATGGCACCGTGCGAAA 25939
>seq2641
Length=38183
Score = 91.5 bits (100), Expect = 1e-12
Identities = 191/283 (67%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|| ||||| || ||||| || || || ||||| | ||| | ||||| || | | |||
Sbjct 32057 ACGAGACGGTTGTCAAAGTCCTCTCCACCCAAATGAGTGTCTCCTGCAGTCGACTTCACT 32116
Query 518075 TGGAAAAGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132
| ||| | || || || | | || || || ||||| || || ||||||| ||
Sbjct 32117 TCGAAGATGCCCTCCTCGATTGTGAGCAATGAA--ACATCGAAAGTGCCGCCACCCAAAT 32174
Query 518133 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 518192
| ||||| || || || || || || ||||||||||| || |||| ||||
Sbjct 32175 CGAAAATGAGGACGTTGCGCTCGCCCTCGGTCTTCTTATCAAGACCGTAGGCAATGGCAG 32234
Query 518193 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 518252
| || ||||| || || || || | | || || || || ||||| || ||||| |
Sbjct 32235 CTGCGGTTGGCTCGTTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCATCCT 32294
Query 518253 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
| || ||||||| || || ||||| || ||||| ||||||||
Sbjct 32295 TGGTTGCTTGTCGCTGCGAGTCGTTGAAGTATGCCGGAACAGT 32337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780657104807686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |