Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2641 275 8e-69 seq435 152 7e-32 seq2659 116 5e-21 >seq2641 Length=38183 Score = 275 bits (304), Expect = 8e-69 Identities = 485/704 (69%), Gaps = 12/704 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || |||||||| || || || || || |||| || ||||| ||||| || Sbjct 32069 TCAAAGTCCTCTCCACCCAAATGAGTGTCTCCTGCAGTCGACTTCACTTCGAAGATGCCC 32128 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| |||||||| || || || ||||||| || |||||||| ||| Sbjct 32129 TCCTCGATTGTGAGCAATGAAACATCGAAAGTGCCGCCACCCAAATCGAAAATGAGGACG 32188 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | |||||||| |||||||| || || || || || ||||| || Sbjct 32189 TTGCGCTCGCCCTCGGTCTTCTTATCAAGACCGTAGGCAATGGCAGCTGCGGTTGGCTCG 32248 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| ||||| | ||||| || || |||||||| Sbjct 32249 TTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCATCCTTGGTTGCTTGTCGC 32308 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| ||||| || || ||||| |||| |||| | ||||| Sbjct 32309 TGCGAGTCGTTGAAGTATGCCGGAACAGTGACGACTGCGTTGTTGACGGTGCCGCCGAGG 32368 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| || ||||| ||||| ||||| || | | Sbjct 32369 TATGACTCAGCAGTCTCGCGCATCTTGGTGAGGACCATGGATGAGATCTCCTCTGGTGTG 32428 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 ||| ||| || || || || || || | | | || || || |||| | Sbjct 32429 AACGTCTTCTCCTCGCCTTTGAACTCGACCTGGACGACTGGCTT----GC--CACCCTTG 32482 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| ||||| | | | | ||||| || | || |||| | ||| | ||||| Sbjct 32483 TCGATGACCTTGAAGGGGAAGTGCTTCATGTCTGCCTGCACCTCTGCGTCTGCGAACTTG 32542 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| | ||||| || || || || ||||| | ||||||||||| ||||||| Sbjct 32543 CGGCCGATTAATCGCTTGGCGTCGAAGACGGTGTTGTGTGGGTTCATGGCGACTTGGTTC 32602 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| ||||| ||||| || | | | || || || ||| |||| || || Sbjct 32603 TTTGCGGCGTCACCGATGAGACGCTCGGTGT---CGGTGAAGGCAACGAACGAGGGTGTG 32659 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 ||||| || || |||||||| ||||| || || | ||||| | | ||| || ||| Sbjct 32660 GTTCGGTTACCCTGGTCGTTGGCAATGATCTCAATACGGTCATCTCTGAAGATACCCACG 32719 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || || ||||| || || ||||| |||||||||||| | | ||| Sbjct 32720 CAAGAGTACGTGGTACCCAAATCGATACCGATTGCTGGTGCCAT 32763 >seq435 Length=71824 Score = 152 bits (168), Expect = 7e-32 Identities = 236/331 (71%), Gaps = 11/331 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || || || || ||||| || | ||| || |||| ||| Sbjct 37989 ATCGAAATCTTCACCACCAAGATGGGTGTCACCAGCGGTAGCCTGGACCTCGAAGACACC 37930 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||| | | | | || |||||||| ||||||||||| || || | || || Sbjct 37929 TTGGTCAACGGTCAGGATGGAGACATCAAAAGTACCACCACCAAGATCGTA---GACTAT 37873 Query 7576 GTTCGTATCGTCGTCTTTGT---TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | || | ||| || |||| |||| ||||||||||| |||| ||| || || || || Sbjct 37872 GATC-TGGCGT--TCCTTGTCAGTCTTGTCGAGACCGTAGGCGAGAGCGGCGGCAGTAGG 37816 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||||||| | || || ||| || ||||| || ||||| | ||||| || || || Sbjct 37815 TTCATTAACGACTCGCAGCACA-TTGAGGCCTGCGATAGTACCAGCATCCTTGGTGGCAG 37757 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 || || | ||||| |||||||| || || || || || |||| ||| |||| || Sbjct 37756 CGCGCTGAGCGTCGTTGAAGTAGGCAGGAACAGTGACAACTGCGTTGTGGACCTTCTCAC 37697 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782 | ||||| || || |||| || |||||||| Sbjct 37696 CAAGATAAGACTCGGCGACCTCCTTCATTTT 37666 >seq2659 Length=37306 Score = 116 bits (128), Expect = 5e-21 Identities = 215/315 (68%), Gaps = 3/315 (1%) Strand=Plus/Minus Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || || || || ||||| |||| ||| || | |||| Sbjct 6863 ACCACCCAAGTGGGTGTCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTG 6804 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | || ||||| || || |||||||| || || | || || ||||| || | Sbjct 6803 GAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGTAGATCAGGACGTTTCGCTCCTT 6744 Query 7588 GTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 || ||| | |||||||||| |||||||| || || || || || |||||||| Sbjct 6743 CTCAGACTTGCCAGAACCGAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTAATAAT 6684 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 || || ||| |||||||| || | | || || || || || |||| || || Sbjct 6683 GCGGAGGACGTTAAGGCCAGCGATGGCACCGGCGTCCTTGGTAGCCTGTCTCTGGTTGTC 6624 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 |||||||||||| ||||| || | ||| || | | ||| ||||| ||||| | | ||| Sbjct 6623 GTTAAAGTAGGCTGGGACAGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGGTTTC 6564 Query 7765 CGCGATATCTTTCAT 7779 || | || ||||| Sbjct 6563 AGCAACCTCCTTCAT 6549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106354658040