Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2641 275 8e-69
seq435 152 7e-32
seq2659 116 5e-21
>seq2641
Length=38183
Score = 275 bits (304), Expect = 8e-69
Identities = 485/704 (69%), Gaps = 12/704 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || || |||||||| || || || || || |||| || ||||| ||||| ||
Sbjct 32069 TCAAAGTCCTCTCCACCCAAATGAGTGTCTCCTGCAGTCGACTTCACTTCGAAGATGCCC 32128
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| |||||||| || || || ||||||| || |||||||| |||
Sbjct 32129 TCCTCGATTGTGAGCAATGAAACATCGAAAGTGCCGCCACCCAAATCGAAAATGAGGACG 32188
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | |||||||| |||||||| || || || || || ||||| ||
Sbjct 32189 TTGCGCTCGCCCTCGGTCTTCTTATCAAGACCGTAGGCAATGGCAGCTGCGGTTGGCTCG 32248
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||| ||||| | ||||| || || ||||||||
Sbjct 32249 TTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCATCCTTGGTTGCTTGTCGC 32308
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
||||| ||||| ||||| ||||| || || ||||| |||| |||| | |||||
Sbjct 32309 TGCGAGTCGTTGAAGTATGCCGGAACAGTGACGACTGCGTTGTTGACGGTGCCGCCGAGG 32368
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || ||| ||||| || ||||| ||||| ||||| || | |
Sbjct 32369 TATGACTCAGCAGTCTCGCGCATCTTGGTGAGGACCATGGATGAGATCTCCTCTGGTGTG 32428
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
||| ||| || || || || || || | | | || || || |||| |
Sbjct 32429 AACGTCTTCTCCTCGCCTTTGAACTCGACCTGGACGACTGGCTT----GC--CACCCTTG 32482
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| ||||| | | | | ||||| || | || |||| | ||| | |||||
Sbjct 32483 TCGATGACCTTGAAGGGGAAGTGCTTCATGTCTGCCTGCACCTCTGCGTCTGCGAACTTG 32542
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| | ||||| || || || || ||||| | ||||||||||| |||||||
Sbjct 32543 CGGCCGATTAATCGCTTGGCGTCGAAGACGGTGTTGTGTGGGTTCATGGCGACTTGGTTC 32602
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||| ||||| ||||| || | | | || || || ||| |||| || ||
Sbjct 32603 TTTGCGGCGTCACCGATGAGACGCTCGGTGT---CGGTGAAGGCAACGAACGAGGGTGTG 32659
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
||||| || || |||||||| ||||| || || | ||||| | | ||| || |||
Sbjct 32660 GTTCGGTTACCCTGGTCGTTGGCAATGATCTCAATACGGTCATCTCTGAAGATACCCACG 32719
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| || ||||| || || ||||| |||||||||||| | | |||
Sbjct 32720 CAAGAGTACGTGGTACCCAAATCGATACCGATTGCTGGTGCCAT 32763
>seq435
Length=71824
Score = 152 bits (168), Expect = 7e-32
Identities = 236/331 (71%), Gaps = 11/331 (3%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||||||||||||||| | || || || || ||||| || | ||| || |||| |||
Sbjct 37989 ATCGAAATCTTCACCACCAAGATGGGTGTCACCAGCGGTAGCCTGGACCTCGAAGACACC 37930
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||| | | | | || |||||||| ||||||||||| || || | || ||
Sbjct 37929 TTGGTCAACGGTCAGGATGGAGACATCAAAAGTACCACCACCAAGATCGTA---GACTAT 37873
Query 7576 GTTCGTATCGTCGTCTTTGT---TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
| || | ||| || |||| |||| ||||||||||| |||| ||| || || || ||
Sbjct 37872 GATC-TGGCGT--TCCTTGTCAGTCTTGTCGAGACCGTAGGCGAGAGCGGCGGCAGTAGG 37816
Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
|||||||| | || || ||| || ||||| || ||||| | ||||| || || ||
Sbjct 37815 TTCATTAACGACTCGCAGCACA-TTGAGGCCTGCGATAGTACCAGCATCCTTGGTGGCAG 37757
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
|| || | ||||| |||||||| || || || || || |||| ||| |||| ||
Sbjct 37756 CGCGCTGAGCGTCGTTGAAGTAGGCAGGAACAGTGACAACTGCGTTGTGGACCTTCTCAC 37697
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782
| ||||| || || |||| || ||||||||
Sbjct 37696 CAAGATAAGACTCGGCGACCTCCTTCATTTT 37666
>seq2659
Length=37306
Score = 116 bits (128), Expect = 5e-21
Identities = 215/315 (68%), Gaps = 3/315 (1%)
Strand=Plus/Minus
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || || || || ||||| |||| ||| || | ||||
Sbjct 6863 ACCACCCAAGTGGGTGTCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTG 6804
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | || ||||| || || |||||||| || || | || || ||||| || |
Sbjct 6803 GAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGTAGATCAGGACGTTTCGCTCCTT 6744
Query 7588 GTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644
|| ||| | |||||||||| |||||||| || || || || || ||||||||
Sbjct 6743 CTCAGACTTGCCAGAACCGAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTAATAAT 6684
Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704
|| || ||| |||||||| || | | || || || || || |||| || ||
Sbjct 6683 GCGGAGGACGTTAAGGCCAGCGATGGCACCGGCGTCCTTGGTAGCCTGTCTCTGGTTGTC 6624
Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764
|||||||||||| ||||| || | ||| || | | ||| ||||| ||||| | | |||
Sbjct 6623 GTTAAAGTAGGCTGGGACAGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGGTTTC 6564
Query 7765 CGCGATATCTTTCAT 7779
|| | || |||||
Sbjct 6563 AGCAACCTCCTTCAT 6549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635106354658040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |