Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1990 100 3e-16 >seq1990 Length=45585 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 153795 GGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGC 153854 || ||||||||||| ||||||||||| | |||||| | |||||||| || ||||| Sbjct 33449 GGTGGTCCTCATGCAGCATTCTTTGCTGTCAGTGACAAGCACAAGAGAAAAATTCCTGGT 33390 Query 153855 AGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAG 153914 || | | |||| ||| |||| || || || || ||| | |||||| | ||| Sbjct 33389 CGACTCATCGGTCTCTCAAAAGATCGTCTGGGCAACAATGCAGCTCGTTTAGCATTGCAG 33330 Query 153915 ACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCA 153974 || | |||||||||||| | | || || || || || || ||||||| ||||| || Sbjct 33329 ACCCGGGAGCAGCATATCCGACGTGAGAAGGCTACTAGCAATGTCTGCACCGCTCAAGCT 33270 Query 153975 CTGCTGGCTAATATG 153989 ||||| || || ||| Sbjct 33269 CTGCTTGCAAACATG 33255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579188683027040