Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3064 96.9 3e-14 seq2641 86.0 5e-11 >seq3064 Length=20006 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| |||||||| || || ||||| || || || ||||| || ||||| |||| ||| Sbjct 15784 ACTGTTCCAGCATACTTCAACGACTCTCAGCGACAGGCTACCAAGGATGCCGGACAGATT 15843 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||| || | ||| | ||| | ||||| || || ||||||||||| ||||| || || Sbjct 15844 TCTGGTCTCACTGTGCACCGTGTGATCAACGAGCCAACTGCTGCTGCTCTTGCCTACGGC 15903 Query 550529 CTTGATAA 550536 ||||| || Sbjct 15904 CTTGAGAA 15911 >seq2641 Length=38183 Score = 86.0 bits (94), Expect = 5e-11 Identities = 253/385 (66%), Gaps = 5/385 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA- 552268 || ||||| |||||||||||||| ||||| || |||| || || ||||| ||||| | Sbjct 31620 AACCCAGACGAGGCTGTTGCCTACGGTGCTGCTGTTCAGGCCGCCATTCTCTCTGGTGAC 31561 Query 552269 AACTGATGAAAAACTACAAA--ATATTGTACTTG-TAGATGTTACTCCTCTATCTCTTGG 552325 | || | || | || || | || | |||| | ||||| |||| | ||||| || Sbjct 31560 ACCTCCAGCAAGTCGACCAACGAGATCCT-CTTGCTCGATGTCGCTCCGTTGTCTCTCGG 31502 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | || || | || ||| | |||||| ||| ||| | | || || || || || Sbjct 31501 TATCGAGACTGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATCCCAAC 31442 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || || || || ||||| | ||| || || || | | ||| || || | Sbjct 31441 CAAGAAGTCCGAGGTGTTCTCTACCTTTTCCGACAACCAGCCAGGTGTGCTCATCCAGGT 31382 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 || ||||| ||| | || ||||| ||||||| || || | || | | Sbjct 31381 ATTCGAAGGCGAACGCGCTAGAACGAAAGACAATAATCTCCTCGGCAAGTTCGAGCTTAC 31322 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || ||||| || || || ||||| || || || || || ||||| ||||| | ||||| Sbjct 31321 CGGCATTCCACCCGCACCACGTGGTGTTCCACAGATCGAGGTTACATTCGACCTTGATGC 31262 Query 552566 CAATGGAATTTTGAATGTGACTGCT 552590 |||||||| |||| || ||||| Sbjct 31261 TAATGGAATCATGAACGTATCTGCT 31237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029119841697190