Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3064 96.9 3e-14
seq2641 86.0 5e-11
>seq3064
Length=20006
Score = 96.9 bits (106), Expect = 3e-14
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| |||||||| || || ||||| || || || ||||| || ||||| |||| |||
Sbjct 15784 ACTGTTCCAGCATACTTCAACGACTCTCAGCGACAGGCTACCAAGGATGCCGGACAGATT 15843
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|||| || | ||| | ||| | ||||| || || ||||||||||| ||||| || ||
Sbjct 15844 TCTGGTCTCACTGTGCACCGTGTGATCAACGAGCCAACTGCTGCTGCTCTTGCCTACGGC 15903
Query 550529 CTTGATAA 550536
||||| ||
Sbjct 15904 CTTGAGAA 15911
>seq2641
Length=38183
Score = 86.0 bits (94), Expect = 5e-11
Identities = 253/385 (66%), Gaps = 5/385 (1%)
Strand=Plus/Minus
Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA- 552268
|| ||||| |||||||||||||| ||||| || |||| || || ||||| ||||| |
Sbjct 31620 AACCCAGACGAGGCTGTTGCCTACGGTGCTGCTGTTCAGGCCGCCATTCTCTCTGGTGAC 31561
Query 552269 AACTGATGAAAAACTACAAA--ATATTGTACTTG-TAGATGTTACTCCTCTATCTCTTGG 552325
| || | || | || || | || | |||| | ||||| |||| | ||||| ||
Sbjct 31560 ACCTCCAGCAAGTCGACCAACGAGATCCT-CTTGCTCGATGTCGCTCCGTTGTCTCTCGG 31502
Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385
| | || || | || ||| | |||||| ||| ||| | | || || || || ||
Sbjct 31501 TATCGAGACTGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATCCCAAC 31442
Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445
|| || || || || ||||| | ||| || || || | | ||| || || |
Sbjct 31441 CAAGAAGTCCGAGGTGTTCTCTACCTTTTCCGACAACCAGCCAGGTGTGCTCATCCAGGT 31382
Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505
|| ||||| ||| | || ||||| ||||||| || || | || | |
Sbjct 31381 ATTCGAAGGCGAACGCGCTAGAACGAAAGACAATAATCTCCTCGGCAAGTTCGAGCTTAC 31322
Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565
|| ||||| || || || ||||| || || || || || ||||| ||||| | |||||
Sbjct 31321 CGGCATTCCACCCGCACCACGTGGTGTTCCACAGATCGAGGTTACATTCGACCTTGATGC 31262
Query 552566 CAATGGAATTTTGAATGTGACTGCT 552590
|||||||| |||| || |||||
Sbjct 31261 TAATGGAATCATGAACGTATCTGCT 31237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029119841697190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |