Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1779 183 6e-41 seq2619 147 4e-30 >seq1779 Length=148467 Score = 183 bits (202), Expect = 6e-41 Identities = 764/1169 (65%), Gaps = 49/1169 (4%) Strand=Plus/Minus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGA 221771 || ||||| || || |||||||| || || | | |||| |||||||| || |||| Sbjct 97861 GCAAGGTTGCAGACAGCCACCTCATC--TGGAGCAGAGTACTCGATGATCTCAGTGCAGA 97804 Query 221772 GGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 |||| | ||| ||| || || |||| || || || |||||| ||| ||| || Sbjct 97803 GGTTA--GAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATC 97746 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| || || || || ||||| |||||| ||||||| | ||||| | ||||| Sbjct 97745 CTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGGCATACCAGAT 97686 Query 221890 TTCTCTGG-CGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAG 221947 | ||||| ||| || ||| || | | | |||||| ||| | | | || ||| Sbjct 97685 CT-TCTGGGCGCGAACAGTC-TCGCGGCCACGACCCTCCTTCTCGTACTGCTCG---TAG 97631 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC-CTGGCGGGACACAT 222006 ||| | || || | || || || | || | || || || ||| | |||| ||||| Sbjct 97630 AGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGG-CACAT 97572 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || |||| | ||| || | || | || |||||| || ||||||||||| || || Sbjct 97571 GAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGC 97512 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 || || || | || ||| |||||| ||| | ||| || | ||||||| || Sbjct 97511 GAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAA 97452 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 | | || ||||||||||| ||||| || || | ||| | || ||||| |||||||| Sbjct 97451 TGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTT 97392 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||| | || | | ||| | |||| ||| || || | || ||||||| Sbjct 97391 GCCACCCTGGT-CAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTC 97333 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACC-GCCGGCC--CTCAGGTTACTGG 222302 ||||||| ||||| ||||| ||||||| || | || | | ||| | | Sbjct 97332 CGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGA-ACG 97274 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 || | || || || || |||| || |||||||| || || ||||||||||||| Sbjct 97273 TTGAGA--CCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGT 97216 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-AT 222421 ||| ||||| || ||| ||||| | || | || || || || | | ||| | || Sbjct 97215 AGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCAT 97156 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | || | | || ||| |||| |||||||| |||||||| ||||| | ||||| Sbjct 97155 TAGGCGTACCA-GCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATG 97097 Query 222482 AGATCGTACGTCTC--TACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCA 222537 | ||| ||||| || | || | |||| || ||||| || | || | | || Sbjct 97096 TAGTTGTAGGTCTCAATAGCAGCCT--CAATGTCCTCGCCGTGGATACCAACA-GCCACA 97040 Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAG---CTGGAGAGCAGGTA 222594 | |||| ||| | ||| || | || | | | ||||| | || ||||||||| Sbjct 97039 -CGCATGATCATTTGCTGCGGTCGCT---CTGCAACCTTGCCGTCAATGCGGAGCAGGTA 96984 Query 222595 CGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCAC 222654 |||| |||| |||||||| |||||||| | | || ||||| | | | | || | Sbjct 96983 CGATCGCTCCAACGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAAT 96924 Query 222655 GGCGGCGTCCAGCTC--CGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACG 222712 ||| | || ||||| || | ||||| | | || | | | | ||| || | Sbjct 96923 GGCTGAGTTGAGCTCATCGGC--GTGCTCCATGACCACTTTGTATGTGTACTCTGAGATC 96866 Query 222713 AGGGGAGC-GTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATC 222771 | || || | | || || || | ||||| || | |||||| || | | | | || | Sbjct 96865 ATAGGCGCAGCTTTCCTT-GTCTTTGGGTTGACATAGTGGTAGAGATCTGAGACGACAGC 96807 Query 222772 AGAGAACGTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAG-A 222830 |||||| | ||||||||||| || || || || |||||||| | || |||| | Sbjct 96806 GGAGAACTGCTTCTTCGTCTGCTTGTGGAGGTTGGAAACAGCGATCCGTG-CGGCAAGAA 96748 Query 222831 TACCATAGTCAGGGTGCACGGTGGTCATG 222859 | | ||||| ||||| |||||||||| Sbjct 96747 TTGCGTAGTCGGGGTGGGTGGTGGTCATG 96719 >seq2619 Length=45072 Score = 147 bits (162), Expect = 4e-30 Identities = 555/859 (65%), Gaps = 28/859 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| |||||||||||||||| || || ||||||||| || |||||||||||| Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243 Query 25537 GCCAAGGACATGGACGGCTGGTACGCT---CTATCCAAAGACGAGCAGCATTT--TCTCA 25591 |||||||| | ||| |||| || || | | ||||||| | || ||||| Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || | || ||||| || || ||||| || || || || ||||| ||| ||| Sbjct 29304 CAT--GTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGC 29361 Query 25652 GATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | | ||||| ||| ||| | || | | || |||||||| |||||||| Sbjct 29362 GCTTCAGCGGTGAAGTACAGATACCCGAAGCACGA-TGCTTCTACGGATTCCAGATCATG 29420 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTC 25770 || || || | ||||| || || || |||| | || ||||| ||| || Sbjct 29421 ATGGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACAT--CAG-CGAA 29477 Query 25771 GCCGAG-AGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || || || |||| || || |||||||| |||| || | ||| | |||| Sbjct 29478 CCCAAGCAGCGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAGAAG 29537 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || ||||| || |||||| | ||| | | || |||| | || || | Sbjct 29538 GCTGACTGGGCATTGCGATGGATCTCTGACAAGAACTCGACTTTTGCCTGCCGATTGATC 29597 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 ||||| ||||| || ||||||||||| ||| ||||| || || ||||||||||| | Sbjct 29598 GCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTG 29657 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || || ||||||||| || ||| || || || || | ||| | ||||| Sbjct 29658 AAGAAGCGTGGCCTCATGCCCGGTCT-TACATTCTCGAATGAATTGATCTCGCGTGACGA 29716 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT- 26065 ||| | |||| ||| || || |||||||| | | | || | | |||| || Sbjct 29717 GGGCATGCACACAGACTTCGCATGCCTGCTGTTCTCTCACCTCAAGA---ACAAGCCAGA 29773 Query 26066 CTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 | || | | || | || |||||| || ||||| | ||| ||| | || || | Sbjct 29774 CGCATCACTC-GTGCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCA 29832 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 | |||||||| | |||||| |||| ||||| | Sbjct 29833 CAGATGCGCTCCCAGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATCG 29892 Query 26186 AGTATGTGGCCGACCATCTGCTGT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 ||| ||| || |||| |||| ||| | || |||| || || |||||| ||||| Sbjct 29893 AGTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAATCAGAAGT-TCTACA--ACGCCA 29949 Query 26245 --AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 ||||| ||||| || ||||| ||||| || | | || |||||||||||||| || | Sbjct 29950 CCAACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGA 30009 Query 26303 AGAGGGTCGGCGACTATCA 26321 || | || || ||||| || Sbjct 30010 AGCGTGTTGGTGACTACCA 30028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928806125224640