Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq2641 95.1 8e-14
seq1001 89.7 3e-12
>seq2641
Length=38183
Score = 95.1 bits (104), Expect = 8e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
||||| | |||||||| ||||| || || || || || || |||||||| || |||||
Sbjct 32346 GCAGTCGTCACTGTTCCGGCATACTTCAACGACTCGCAGCGACAAGCAACCAAGGATGCC 32287
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| ||||| || || || || | ||||| || || || ||||| ||||| || ||
Sbjct 32286 GGTCTCATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCAACCGCAGCTGCCATT 32227
Query 474857 GCTTATGGTCTTGATAAGAA 474876
|| || ||||||||||||||
Sbjct 32226 GCCTACGGTCTTGATAAGAA 32207
>seq1001
Length=158095
Score = 89.7 bits (98), Expect = 3e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| || ||||| ||||| || || || || || || || || |||| |||||
Sbjct 25023 CGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTG 25082
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | ||| || |||||||| || || ||||| ||||| || ||||| ||||||||||||
Sbjct 25083 CGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCT 25142
Query 480672 TCCTTGTCTTGAATCTT 480688
|||||||| || |||||
Sbjct 25143 TCCTTGTCCTGGATCTT 25159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268036317247988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |