Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2641 338 8e-88 seq1001 190 3e-43 seq435 145 1e-29 seq3064 113 6e-20 seq2659 95.1 2e-14 >seq2641 Length=38183 Score = 338 bits (374), Expect = 8e-88 Identities = 569/821 (69%), Gaps = 7/821 (1%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||||||||| ||| | || ||||| || |||||||| || || ||||||||| | || Sbjct 31935 GCTCTTCGTCGCCTTCGCACAGCATGCGAGCGTGCCAAGCGTACCCTCTCTTCTTCCGCC 31876 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || ||| ||| || || || || ||||| || | || ||| Sbjct 31875 CAGACCTCCATCGAGATCGACTCGCTGTACGAGGGTATCGATTTCTACACCTCCATCACC 31816 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | ||| | || | |||||| || || || Sbjct 31815 CGTGCCCGTTTCGAGGAGCTCTGCCAGGATCTCTTCCGCTCTACTATGGAGCCGGTCGAG 31756 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || |||||||| ||||| || |||||| || | || |||||||| || || Sbjct 31755 CGCACTCTCCGTGACGCCAAGATCGACAAGTCTTCCGTCCACGAGATTGTCCTAGTCGGT 31696 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || |||||||| || ||||| || ||||| | || ||||||||| || || Sbjct 31695 GGCTCCACCCGTATCCCAAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 31636 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 |||||| | |||||||| || || || ||||| || ||||| || |||||||| || Sbjct 31635 CCAAACAAGTCCATCAACCCAGACGAGGCTGTTGCCTACGGTGCTGCTGTTCAGGCCGCC 31576 Query 196421 ATTCTCTCAGGTGTTGACAATAATAA--CGTCCA---AGATCTTCTGCTACTTGATGTTG 196475 |||||||| |||| | | || || ||| ||||| ||| | || ||||| | Sbjct 31575 ATTCTCTCTGGTGACACCTCCAGCAAGTCGACCAACGAGATCCTCT--TGCTCGATGTCG 31518 Query 196476 CACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGA 196535 | || | || || ||| | || || || |||||||| |||||| | || | | | Sbjct 31517 CTCCGTTGTCTCTCGGTATCGAGACTGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCA 31458 Query 196536 ACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAG 196595 |||| || || || || |||||| | || || || || | |||||| || || |||| Sbjct 31457 ACACCACCATCCCAACCAAGAAGTCCGAGGTGTTCTCTACCTTTTCCGACAACCAGCCAG 31398 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTG 196655 |||| | || || |||| ||||| |||||| | | | || || || |||| || | Sbjct 31397 GTGTGCTCATCCAGGTATTCGAAGGCGAACGCGCTAGAACGAAAGACAATAATCTCCTCG 31338 Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715 | | ||||| | || || |||||| | ||||| | |||||||||||||| | ||| Sbjct 31337 GCAAGTTCGAGCTTACCGGCATTCCACCCGCACCACGTGGTGTTCCACAGATCGAGGTTA 31278 Query 196716 GCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCA 196775 ||||| | || || |||||||| | ||||| | ||| || |||| |||||| Sbjct 31277 CATTCGACCTTGATGCTAATGGAATCATGAACGTATCTGCTCTCGAGAAGGGCACTGGCA 31218 Query 196776 AATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAAC 196835 | | | |||||||| || ||||| |||||||| || ||||| |||||||| ||||| | Sbjct 31217 AGACCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTTTCCAAGGAGGAGATTGAGC 31158 Query 196836 GTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 ||||| || || || || ||||||| ||| || || ||| Sbjct 31157 GTATGCTTGCTGAGGCCGAGAAGTACAAGGAGGAGGATGAG 31117 Score = 221 bits (244), Expect = 2e-52 Identities = 474/706 (67%), Gaps = 7/706 (1%) Strand=Plus/Minus Query 195284 TACATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTA 195343 |||| ||| | | ||| || ||||||||||| || || || ||||| || || ||| | Sbjct 32769 TACACCATGGCACCAGCAATCGGTATCGATTTGGGTACCACGTACTCTTGCGTGGGTATC 32710 Query 195344 TGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCG 195403 | | |||| ||| | ||||| || | || ||||| || ||||| || || || ||| Sbjct 32709 TTCAGAGATGACCGTATTGAGATCATTGCCAACGACCAGGGTAACCGAACCACACCCTCG 32650 Query 195404 TACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCT 195463 | ||||||||| || || | || |||||| | || || |||||||| || || || Sbjct 32649 TTCGTTGCCTTCACCGACACCGAGCGTCTCATCGGTGACGCCGCAAAGAACCAAGTCGCC 32590 Query 195464 ATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGAT 195523 |||||||| ||| || ||||| ||||| ||||| | || || |||||||| | || Sbjct 32589 ATGAACCCACACAACACCGTCTTCGACGCCAAGCGATTAATCGGCCGCAAGTTCGCAGAC 32530 Query 195524 AAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTG 195581 | || || | || || ||| ||| | | | ||| | || | | ||||| Sbjct 32529 GCAGAGGTGCAGGCAGACATGAAGCACTTCCCCT-TCAAGGTCATCGACAAGGGTGGC-- 32473 Query 195582 ATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAA 195641 ||||| | | | || || || | || ||| |||| || | || || || | Sbjct 32472 --AAGCCAGTCGTCCAGGTCGAGTTCAAAGGCGAGGAGAAGACGTTCACACCAGAGGAGA 32415 Query 195642 TTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTG 195701 | || || ||||| | | |||||| |||||||| || || | | | || || | Sbjct 32414 TCTCATCCATGGTCCTCACCAAGATGCGCGAGACTGCTGAGTCATACCTCGGCGGCACCG 32355 Query 195702 TGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAA 195761 | || | ||||| || ||||| || || ||||||| || || || ||||| || || | Sbjct 32354 TCAACAACGCAGTCGTCACTGTTCCGGCATACTTCAACGACTCGCAGCGACAAGCAACCA 32295 Query 195762 AGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGG 195821 |||| || | | ||||| || || ||| || | || ||||| || ||||| || | Sbjct 32294 AGGATGCCGGTCTCATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCAACCGCAG 32235 Query 195822 CTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTG 195881 |||| ||||| || ||||| || ||||| | || | || || || | || || | Sbjct 32234 CTGCCATTGCCTACGGTCTTGATAAGAAGACCGAGGGCGAGCGCAACGTCCTCATTTTCG 32175 Query 195882 ATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAG 195941 || | ||||| || || || ||||| ||| | |||| || || | || || ||||||| Sbjct 32174 ATTTGGGTGGCGGCACTTTCGATGTTTCATTGCTCACAATCGAGGAGGGCATCTTCGAAG 32115 Query 195942 TAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||| | ||||| || || |||||| | ||||| || || || || Sbjct 32114 TGAAGTCGACTGCAGGAGACACTCATTTGGGTGGAGAGGACTTTGA 32069 >seq1001 Length=158095 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || |||||||| |||||||||||||||||||||| Sbjct 25020 GTGGTATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGT 24961 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || |||| ||||||| ||||| ||||| || |||||||| | Sbjct 24960 CTTCCGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAG 24901 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || ||||| || ||||| || || || || ||| | | || | Sbjct 24900 ACCAGCAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACT 24841 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || |||||||| ||||| |||||||| || | || || |||||| Sbjct 24840 ACAACATCCAGAAGGAGTCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGT 24788 Score = 161 bits (178), Expect = 1e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||||||||| || ||||| ||||| || | || | Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGAGC 25160 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||| ||||| || |||||||| || || ||||| || || || Sbjct 25159 AAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCAAG 25100 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || ||||| || || ||| |||| |||||| |||| |||||||| || || ||| Sbjct 25099 CAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCCAC 25040 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| || | || || |||||| Sbjct 25039 CTTGTCCTCCGCCTGCGCGGTGGT 25016 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || || |||||||| || || || || | Sbjct 24792 GTGGTATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAAT 24733 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| ||||| || |||| | ||||||||||| ||||| ||||| ||||| | Sbjct 24732 CTTCAGACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAG 24673 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || ||||| || |||||||| || || || || | || | Sbjct 24672 ACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGCGACT 24613 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| ||||| ||| | || || | || || ||||| Sbjct 24612 ACAACATCCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGTCTGCGTGGTGG 24561 >seq435 Length=71824 Score = 145 bits (160), Expect = 1e-29 Identities = 265/383 (69%), Gaps = 15/383 (4%) Strand=Plus/Plus Query 195612 GTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGG 195671 ||||| |||| |||| |||| |||||| | ||| ||| | | || ||||||| Sbjct 37616 GTGAGGAGAAGACATTTACTCCAGAAGAAGTCTCGAGCATGATCCTCGGAAAAATGAAGG 37675 Query 195672 AGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTT 195731 || || || |||| | ||| | | || | | |||||||| ||||| ||||| | Sbjct 37676 AGGTCGCCGAGTCTTATCTTGGTGAGAAGGTCCACAACGCAGTTGTCACTGTTCCTGCCT 37735 Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || | || || || || ||||| |||| | |||| || || || || | Sbjct 37736 ACTTCAACGACGCTCAGCGCGCTGCCACCAAGGATGCTGGTACTATCGCAGGCCTCAA-T 37794 Query 195792 GT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA-- 195848 || || || | | |||||||| || || || || | || || ||||| ||||||| Sbjct 37795 GTGCTGCGAGTCGTTAATGAACCTACTGCCGCCGCTCTCGCCTACGGTCTCGACAAGACT 37854 Query 195849 -ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATG 195905 ||||||| || |||| | | | || ||||| ||||||||||| ||||||| Sbjct 37855 GACAAGGAACGCCAGATCATAGTCTAC--------GATCTTGGTGGTGGTACTTTTGATG 37906 Query 195906 TCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTC 195965 |||| | || | |||| ||| | ||||| || ||||||| |||||||| || | Sbjct 37907 TCTCCATCCTGACCGTTGACCAAGGTGTCTTCGAGGTCCAGGCTACCGCTGGTGACACCC 37966 Query 195966 ATCTAGGTGGTGAAGATTTCGAT 195988 |||| |||||||||||||||||| Sbjct 37967 ATCTTGGTGGTGAAGATTTCGAT 37989 >seq3064 Length=20006 Score = 113 bits (124), Expect = 6e-20 Identities = 227/330 (69%), Gaps = 15/330 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || ||||| | || || || || || | || || || ||| Sbjct 15727 AAGATGAAGGAGACTGCTGAGGCTTTCCTCGGAAAGACCGTCAAGAACGCCGTCGTCACT 15786 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || |||||||| || ||||| || | ||| | Sbjct 15787 GTTCCAGCATACTTCAACGACTCTCAGCGACAGGCTACCAAGGATGCCGGACAGATTTCT 15846 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| ||||| | | | ||||| || ||||| || ||||| |||| || || || Sbjct 15847 GGTCT-CACTGTGCACCGTGTGATCAACGAGCCAACTGCTGCTGCTCTTGCCTACGGCCT 15905 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || ||| || ||| ||| | | | ||| ||||| ||||| ||||| || Sbjct 15906 TGAGAAGGAC---GAC-AAGGTCA-----TCGCCGTCTACGATCTTGGTGGAGGTACCTT 15956 Query 195901 TGATGTCTCACTTCTC--AATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 ||| |||| ||||| ||| | || |||| | ||||| || ||| |||| ||| Sbjct 15957 CGATATCTCCATTCTCGAAATCTCCAA--TGGTGTCTTCGAGGTCAAGTCTACCAACGGT 16014 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || || || |||||||| || ||| Sbjct 16015 GACACCCACCTTGGCGGTGAAGACTTTGAT 16044 >seq2659 Length=37306 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/261 (68%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||| | || || ||||||| || |||||||| | ||| || Sbjct 6603 ACTGTCCCAGCCTACTTTAACGACAACCAGAGACAGGCTACCAAGGACGCCGGTGCCATC 6662 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | ||||| || || || || || || || || || || ||| Sbjct 6663 GCTGGCCTTAACGTCCTCCGCATTATTAACGAGCCTACCGCTGCCGCTATCGCCTACGGT 6722 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | |||| || | || ||| || |||||| ||||| |||||||| Sbjct 6723 CTCGGTTCTGGCAAGTCTGAGAAGGAGCGAAACGTCCTGATCTACGATCTTGGTGGTGGA 6782 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || ||| | || | || ||| | ||| || |||||||||||| Sbjct 6783 ACTTTCGATGTCTCTCTCCTCCACATCCAGGGCGGTGTCTTCACTGTCAAGGCTACTGCT 6842 Query 195956 GGTGATACTCATCTAGGTGGT 195976 ||||| || || | |||||| Sbjct 6843 GGTGACACCCACTTGGGTGGT 6863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657835008254320