Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 122 3e-22
seq1446 116 1e-20
seq2726 96.9 1e-14
>seq1779
Length=148467
Score = 122 bits (134), Expect = 3e-22
Identities = 341/523 (65%), Gaps = 3/523 (1%)
Strand=Plus/Minus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||| ||||||||||| ||| || || | ||||||||||| || | |
Sbjct 97816 ATCTCAGTGCAGAGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGG 97757
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| |||||||||||||| || ||| | ||| || |||||| |||| || || |||||
Sbjct 97756 TTGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATG 97697
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||||| | |||| || || | | | || ||| ||| || | |
Sbjct 97696 GCATACCAGATCTTCTGGGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTGC 97637
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|| ||| | | | ||||| || ||| ||| || |||||||||| || |||
Sbjct 97636 TCGTAGAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGG 97577
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939
|| | || | ||| || | ||||||| ||| || | ||| ||||
Sbjct 97576 CACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAA 97517
Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999
| || |||||||||| | || |||||| | ||| || ||||| || || ||
Sbjct 97516 AGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCC 97457
Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059
| |||| || || ||||| || |||||| || || || ||||| ||| | |
Sbjct 97456 ATGAATGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGC 97397
Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116
||| |||||||| || || || |||||||| || ||| |||||| ||||||||||
Sbjct 97396 TTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACC 97337
Query 156117 ATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159
| || ||||| ||||| || || || | || | ||| ||||
Sbjct 97336 AGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAG 97294
>seq1446
Length=151459
Score = 116 bits (128), Expect = 1e-20
Identities = 175/246 (71%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
||||||||||| |||||||| || || || ||||| || ||||| ||||| |||||
Sbjct 25993 CGACGCTGAATGTAACCAGTCTCAGCAGTCTTGACAGCGGTGTCAATAAGACCTTCACGA 26052
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTC 302711
|| |||||||| |||||||| | ||||| || ||| || || | | | ||||| ||||
Sbjct 26053 CCTCCCATAGCGTGGAAGAAGAACTCTTGTGG-CGTCAGTCCACGTAGATAGGAGTTCTC 26111
Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771
|| || ||||| | | || |||| |||| |||| ||||| || || | ||
Sbjct 26112 CACAAATCCACGAGATGCTGGTGAATAGTCGTCTTTGGGGAAGTGCGGAAGCACGCGGTC 26171
Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831
|| ||||| |||| | |||||| || |||| | ||| || || | ||| | ||||
Sbjct 26172 CTTGAAGCCGAATGGAAGACGCTTGCCTTCAAGGGACTGTTGCCCGACTGACGCAGTCAT 26231
Query 302832 CTGCGA 302837
||| ||
Sbjct 26232 CTGTGA 26237
>seq2726
Length=34035
Score = 96.9 bits (106), Expect = 1e-14
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || |||||||| ||||| || || || |||||||||||||| || ||||
Sbjct 18490 TGAGCAATTGTCATACGGGACGGAATGGCGTGTGGGTTGATGATGATGTCTGGCGTCAGG 18431
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
||||| || ||||| ||||| | ||| | || || || | || || || || || ||
Sbjct 18430 CCATCGGCTGTGAACGGCATGT-CTTCTTGTCGGTAGGTGATACCGATCGTACCTTTCTG 18372
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||||| |||||| ||||||||
Sbjct 18371 TCCGTGACGAGAAGCGAACTTGTCACCAAT 18342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471754785124547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |