Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1779 122 3e-22 seq1446 116 1e-20 seq2726 96.9 1e-14 >seq1779 Length=148467 Score = 122 bits (134), Expect = 3e-22 Identities = 341/523 (65%), Gaps = 3/523 (1%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||| ||||||||||| ||| || || | ||||||||||| || | | Sbjct 97816 ATCTCAGTGCAGAGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGG 97757 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || |||||||||||||| || ||| | ||| || |||||| |||| || || ||||| Sbjct 97756 TTGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATG 97697 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||||| | |||| || || | | | || ||| ||| || | | Sbjct 97696 GCATACCAGATCTTCTGGGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTGC 97637 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || ||| | | | ||||| || ||| ||| || |||||||||| || ||| Sbjct 97636 TCGTAGAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGG 97577 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939 || | || | ||| || | ||||||| ||| || | ||| |||| Sbjct 97576 CACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAA 97517 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999 | || |||||||||| | || |||||| | ||| || ||||| || || || Sbjct 97516 AGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCC 97457 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | |||| || || ||||| || |||||| || || || ||||| ||| | | Sbjct 97456 ATGAATGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGC 97397 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| |||||||| || || || |||||||| || ||| |||||| |||||||||| Sbjct 97396 TTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACC 97337 Query 156117 ATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 | || ||||| ||||| || || || | || | ||| |||| Sbjct 97336 AGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAG 97294 >seq1446 Length=151459 Score = 116 bits (128), Expect = 1e-20 Identities = 175/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 ||||||||||| |||||||| || || || ||||| || ||||| ||||| ||||| Sbjct 25993 CGACGCTGAATGTAACCAGTCTCAGCAGTCTTGACAGCGGTGTCAATAAGACCTTCACGA 26052 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTC 302711 || |||||||| |||||||| | ||||| || ||| || || | | | ||||| |||| Sbjct 26053 CCTCCCATAGCGTGGAAGAAGAACTCTTGTGG-CGTCAGTCCACGTAGATAGGAGTTCTC 26111 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 || || ||||| | | || |||| |||| |||| ||||| || || | || Sbjct 26112 CACAAATCCACGAGATGCTGGTGAATAGTCGTCTTTGGGGAAGTGCGGAAGCACGCGGTC 26171 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831 || ||||| |||| | |||||| || |||| | ||| || || | ||| | |||| Sbjct 26172 CTTGAAGCCGAATGGAAGACGCTTGCCTTCAAGGGACTGTTGCCCGACTGACGCAGTCAT 26231 Query 302832 CTGCGA 302837 ||| || Sbjct 26232 CTGTGA 26237 >seq2726 Length=34035 Score = 96.9 bits (106), Expect = 1e-14 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| ||||| || || || |||||||||||||| || |||| Sbjct 18490 TGAGCAATTGTCATACGGGACGGAATGGCGTGTGGGTTGATGATGATGTCTGGCGTCAGG 18431 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 ||||| || ||||| ||||| | ||| | || || || | || || || || || || Sbjct 18430 CCATCGGCTGTGAACGGCATGT-CTTCTTGTCGGTAGGTGATACCGATCGTACCTTTCTG 18372 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||| |||||| |||||||| Sbjct 18371 TCCGTGACGAGAAGCGAACTTGTCACCAAT 18342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471754785124547