Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2789 134 2e-25 seq2619 122 1e-21 seq1779 120 4e-21 seq3 95.1 1e-13 seq3228 89.7 6e-12 >seq2789 Length=186457 Score = 134 bits (148), Expect = 2e-25 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177 ||||||| | |||||| || ||||| ||| | ||||| ||| | | || ||| Sbjct 91369 CGACATCGAGGACTGGGACCAGAAGTTTATGC-AGGTCGACCAGGAGATGTTGTTCGAGA 91427 Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 | ||||| || |||||||| | || |||||| | || ||||| |||| |||||| ||| Sbjct 91428 TCATCCTTGCTGCCAACTATATGGATATCAAGGCACTTCTCGACGTTGGCTGCAAGACTG 91487 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 | ||||||||||||||||||||||| || |||||||| |||||||| || |||||| || Sbjct 91488 TCGCCAACATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTCAACATCCAGA 91547 Query 1592298 ACG 1592300 ||| Sbjct 91548 ACG 91550 >seq2619 Length=45072 Score = 122 bits (134), Expect = 1e-21 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || || || Sbjct 30034 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTAGAGAAATG 29975 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||||| ||| | ||||| | | Sbjct 29974 TTCTCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGAGTGCCAAC 29915 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| ||||| ||||||||||||||||||||||||||||| || |||||||||| | Sbjct 29914 AACAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAGG 29855 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 ||| || || |||| || | | || |||| ||| ||| | || || || |||||| Sbjct 29854 AGCATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTTCAACGATG 29795 Query 868931 AT 868932 || Sbjct 29794 AT 29793 Score = 96.9 bits (106), Expect = 4e-14 Identities = 200/291 (69%), Gaps = 15/291 (5%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||| ||| || || | || |||||||||||||| |||||| Sbjct 29719 CCCTCGTCACGCGAGATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTC 29660 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||||| |||| || ||||| ||||||||||||||||| || ||| Sbjct 29659 TTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAG 29600 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 |||| | || |||||| |||||| | ||||| |||||| || ||| Sbjct 29599 GCGATCAATCGGCAGGCAAA--AGTCGAG----TTCTTGTCAGAGATCCATCGCAATGCC 29546 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTC-C 869413 ||||| ||||| || | | | || | ||||||||||| ||| ||| || || | Sbjct 29545 CAGTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGC 29486 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | | || || ||| ||||||||||| || || || || || ||| Sbjct 29485 TGCTTG---GGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCC 29438 >seq1779 Length=148467 Score = 120 bits (132), Expect = 4e-21 Identities = 209/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| ||| |||| || ||||| || || || |||||||| Sbjct 97385 CTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCCGTTGGA 97326 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||| ||||| | | ||| | ||| | || || | ||| || | || Sbjct 97325 CGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGAACGTTGAGACC 97266 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| || || ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 97265 AATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTC 97206 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGA--CGAGTTTTGCGGGTGCGCCGTG 1630302 || |||| |||||||||| || | ||||| || |||| | ||| | | ||| Sbjct 97205 AATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGC--ATTAGGCGTA 97148 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 || ||| | || |||||||||| ||| ||||| ||| |||||| || |||| Sbjct 97147 CCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATGTAGTTGTAG 97088 Query 1630363 GT 1630364 || Sbjct 97087 GT 97086 >seq3 Length=84643 Score = 95.1 bits (104), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1852499 TTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGA 1852558 ||||||||| | | ||||||||||| ||||| | | |||| |||||||| || Sbjct 1970 TTGTCGAGGAAGCCATGCACGTCGGCCAAGAGCACCGTGACTTCGCAGCCGGCGGCCAGG 1911 Query 1852559 AAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCC 1852618 || ||||| | |||| ||||| ||||||||||| ||| || |||||||||| ||| Sbjct 1910 AACTCGGCGATCTTGAGCATGGGAACAAAGTAGCCACAGTGAGGCTTGCCCGTCGTTGCC 1851 Query 1852619 GTGCCCCAATATATG 1852633 |||||||| || ||| Sbjct 1850 GTGCCCCAGTAGATG 1836 Score = 93.3 bits (102), Expect = 5e-13 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 1852072 CATCTTGCCGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTGGAAGCGCTTC-C 1852130 ||||||||||| || || || || | ||| ||||| | || ||| ||||| | Sbjct 2409 CATCTTGCCGCCTTCCTGCAGACCGGGAATGAGGGGGTTCATCAAGTGAGCACGCTTTGC 2350 Query 1852131 GATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTGCGCTGGTCGCGCC 1852190 || |||||| | ||| | ||| |||| || || ||||| |||||||| | Sbjct 2349 GA-AGCCGACGCGCGGTAATGCCTCGACTGCAAGGGTGAAGATCTTCCGCTGGTCCACGC 2291 Query 1852191 CGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 1852250 |||| || || ||||| ||| | |||| || ||||||||||||||||||||||||||||| Sbjct 2290 CGCCGAATTGTGCGTCCACGCCCAGGTACTCCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2231 >seq3228 Length=15945 Score = 89.7 bits (98), Expect = 6e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 19101 GGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCG 19160 ||||||||||||||||||||| | || || ||| || |||||||||||| || || Sbjct 6252 GGCGAGCCGTGCTTTGACAAGCTGGAAGCGAAGCTGGCGCACGCCATGCTGAGCATTCCT 6311 Query 19161 GCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 || ||||||||||||||||| || ||||| || Sbjct 6312 GCAACCAAGGGATTCGAGATCGGTAGCGGATT 6343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106865842540927