Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2722 138 2e-26 seq2619 136 6e-26 seq2789 111 2e-18 seq3 95.1 2e-13 >seq2722 Length=177584 Score = 138 bits (152), Expect = 2e-26 Identities = 186/255 (73%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| |||||||||||| | || || || || ||| Sbjct 143457 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTCGCAAGCTCACCAGGCAG 143398 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| ||||| | ||| ||||| ||||||| ||| || |||||| || | Sbjct 143397 GATCAATCGCACCGAGGTTTGGATTTCGCGGGAAGAGATGGTCGACTTCTTGTT-GTATG 143339 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || ||||| ||| ||| ||| |||| ||||||||||| || ||||||| Sbjct 143338 CAGCGAGCTTAGATGCCTCAGTGGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 143279 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 || ||||| | ||||||||| || ||| ||||| ||||||||||| | || | Sbjct 143278 GAATGGACATGGCACGGTTGGAGATACCAGTGTCTGGGTGAACCTGCTTGAGGA-CTGGA 143220 Query 1485710 AAACAAAGGACGAGT 1485724 || ||| |||| || Sbjct 143219 GAAGAAAAGACGCGT 143205 >seq2619 Length=45072 Score = 136 bits (150), Expect = 6e-26 Identities = 234/330 (71%), Gaps = 11/330 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 || ||||| || ||||||||| || | || | | || |||||||||||||| ||||| Sbjct 29719 CCCTCGTCACGCGAGATCAATTCATTCGAGAATGTA-AGACCGGGCATGAGGCCACGCTT 29661 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||| ||||||| |||| || ||||| ||||||||||||||||| || || Sbjct 29660 CTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAA 29601 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||| | || ||||||| ||| || | | | | |||||| || ||||| Sbjct 29600 GGCGATCAATCGGCAGGCAAAA--GTCGAGTTCTTGTCAG-AGATCCATCGCAATGCCCA 29544 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTC-CTT 794576 || ||||| || | | | || | ||||||||||| ||| ||| || || || Sbjct 29543 GTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTG 29484 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || | || || ||| |||||||||||| || || ||||| || || ||||||||||| Sbjct 29483 CTTG---GGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTT 29427 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||| || || ||||| Sbjct 29426 CTCCATCATGATCTGGAATCCGTAGAAGCA 29397 Score = 111 bits (122), Expect = 2e-18 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 30042 TGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTA 29983 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | || || |||||| | ||| ||||||| | |||| ||||| ||||| Sbjct 29982 GAGAAATGTTCTCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGA 29923 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||| ||||| ||||| || || ||||||||||||||||| || |||| Sbjct 29922 GTGCCAACAACAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCA 29863 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| |||| || || |||| || ||| || |||| ||| ||| | || || | Sbjct 29862 TGCCGAGGAGCATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTT 29803 Query 794131 ---CGATGATGATCTGC 794144 |||||||| ||||| Sbjct 29802 CAACGATGATGCTCTGC 29786 >seq2789 Length=186457 Score = 111 bits (122), Expect = 2e-18 Identities = 128/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 2035593 TGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGC 2035651 |||||| || ||| ||| |||||||||| | | || ||| | ||||| || || Sbjct 91382 TGGGACCAGAAGTTTATGC-AGGTCGACCAGGAGATGTTGTTCGAGATCATCCTTGCTGC 91440 Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711 |||||| | || |||||| | || ||||| | || |||||||| || |||||| | || Sbjct 91441 CAACTATATGGATATCAAGGCACTTCTCGACGTTGGCTGCAAGACTGTCGCCAACATGAT 91500 Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 |||||||||||| || ||||| || |||||||| || |||||| || ||| Sbjct 91501 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTCAACATCCAGAACG 91550 >seq3 Length=84643 Score = 95.1 bits (104), Expect = 2e-13 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 2411817 GACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGAT 2411876 ||||||||| || | ||| |||||||||| | | ||||||||||| ||||| | Sbjct 1995 GACGAGGTCGATGGGTGCTTTGAGATTGTCGAGGAAGCCATGCACGTCGGCCAAGAGCAC 1936 Query 2411877 CCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC 2411936 | | || || ||||| || || ||||| | || | ||||| ||||||||||| Sbjct 1935 CGTGACTTCGCAGCCGGCGGCCAGGAACTCGGCGATCTTGAGCATGGGAACAAAGTAGCC 1876 Query 2411937 -CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCG 2411991 ||| || ||||||||||||| || |||||||| || |||| || || |||||| Sbjct 1875 ACAG-TGAGGCTTGCCCGTCGTTGCCGTGCCCCAGTAGATGCGGACCGGCCGCTCG 1821 Score = 93.3 bits (102), Expect = 7e-13 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 |||| || |||||||| |||||||| ||||| || || ||||| ||| | |||| | Sbjct 2321 GCAAGGGTGAAGATCTTCCGCTGGTCCACGCCGCCGAATTGTGCGTCCACGCCCAGGTAC 2262 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593 | ||||||||||||||||||||||||||||| Sbjct 2261 TCCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915892066337309