Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2722 138 2e-26
seq2619 136 6e-26
seq2789 111 2e-18
seq3 95.1 2e-13
>seq2722
Length=177584
Score = 138 bits (152), Expect = 2e-26
Identities = 186/255 (73%), Gaps = 3/255 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||||||||||| | || || || || |||
Sbjct 143457 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTCGCAAGCTCACCAGGCAG 143398
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||| ||||| | ||| ||||| ||||||| ||| || |||||| || |
Sbjct 143397 GATCAATCGCACCGAGGTTTGGATTTCGCGGGAAGAGATGGTCGACTTCTTGTT-GTATG 143339
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || ||||| ||| ||| ||| |||| ||||||||||| || |||||||
Sbjct 143338 CAGCGAGCTTAGATGCCTCAGTGGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 143279
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|| ||||| | ||||||||| || ||| ||||| ||||||||||| | || |
Sbjct 143278 GAATGGACATGGCACGGTTGGAGATACCAGTGTCTGGGTGAACCTGCTTGAGGA-CTGGA 143220
Query 1485710 AAACAAAGGACGAGT 1485724
|| ||| |||| ||
Sbjct 143219 GAAGAAAAGACGCGT 143205
>seq2619
Length=45072
Score = 136 bits (150), Expect = 6e-26
Identities = 234/330 (71%), Gaps = 11/330 (3%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
|| ||||| || ||||||||| || | || | | || |||||||||||||| |||||
Sbjct 29719 CCCTCGTCACGCGAGATCAATTCATTCGAGAATGTA-AGACCGGGCATGAGGCCACGCTT 29661
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| | ||| ||||||| |||| || ||||| ||||||||||||||||| || ||
Sbjct 29660 CTTCAACCAGAAGATGGATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAA 29601
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| ||| | || ||||||| ||| || | | | | |||||| || |||||
Sbjct 29600 GGCGATCAATCGGCAGGCAAAA--GTCGAGTTCTTGTCAG-AGATCCATCGCAATGCCCA 29544
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTC-CTT 794576
|| ||||| || | | | || | ||||||||||| ||| ||| || || ||
Sbjct 29543 GTCAGCCTTCTTACGGATACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTG 29484
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|| | || || ||| |||||||||||| || || ||||| || || |||||||||||
Sbjct 29483 CTTG---GGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTT 29427
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || ||||||||| || || |||||
Sbjct 29426 CTCCATCATGATCTGGAATCCGTAGAAGCA 29397
Score = 111 bits (122), Expect = 2e-18
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 30042 TGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCTA 29983
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| || || |||||| | ||| ||||||| | |||| ||||| |||||
Sbjct 29982 GAGAAATGTTCTCCATGAAATCGAATGGGTTGGTGGCGTTGTAGAACTTCTGATTCCCGA 29923
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||| ||||| ||||| || || ||||||||||||||||| || ||||
Sbjct 29922 GTGCCAACAACAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTAGCATTCA 29863
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||||| |||| || || |||| || ||| || |||| ||| ||| | || || |
Sbjct 29862 TGCCGAGGAGCATGACTGGGAGCGCATCTGTGAGGAATTCTTGCTCAATCGCAACAGCTT 29803
Query 794131 ---CGATGATGATCTGC 794144
|||||||| |||||
Sbjct 29802 CAACGATGATGCTCTGC 29786
>seq2789
Length=186457
Score = 111 bits (122), Expect = 2e-18
Identities = 128/170 (75%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 2035593 TGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGC 2035651
|||||| || ||| ||| |||||||||| | | || ||| | ||||| || ||
Sbjct 91382 TGGGACCAGAAGTTTATGC-AGGTCGACCAGGAGATGTTGTTCGAGATCATCCTTGCTGC 91440
Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711
|||||| | || |||||| | || ||||| | || |||||||| || |||||| | ||
Sbjct 91441 CAACTATATGGATATCAAGGCACTTCTCGACGTTGGCTGCAAGACTGTCGCCAACATGAT 91500
Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
|||||||||||| || ||||| || |||||||| || |||||| || |||
Sbjct 91501 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTCAACATCCAGAACG 91550
>seq3
Length=84643
Score = 95.1 bits (104), Expect = 2e-13
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 2411817 GACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGAT 2411876
||||||||| || | ||| |||||||||| | | ||||||||||| ||||| |
Sbjct 1995 GACGAGGTCGATGGGTGCTTTGAGATTGTCGAGGAAGCCATGCACGTCGGCCAAGAGCAC 1936
Query 2411877 CCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC 2411936
| | || || ||||| || || ||||| | || | ||||| |||||||||||
Sbjct 1935 CGTGACTTCGCAGCCGGCGGCCAGGAACTCGGCGATCTTGAGCATGGGAACAAAGTAGCC 1876
Query 2411937 -CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCG 2411991
||| || ||||||||||||| || |||||||| || |||| || || ||||||
Sbjct 1875 ACAG-TGAGGCTTGCCCGTCGTTGCCGTGCCCCAGTAGATGCGGACCGGCCGCTCG 1821
Score = 93.3 bits (102), Expect = 7e-13
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|||| || |||||||| |||||||| ||||| || || ||||| ||| | |||| |
Sbjct 2321 GCAAGGGTGAAGATCTTCCGCTGGTCCACGCCGCCGAATTGTGCGTCCACGCCCAGGTAC 2262
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593
| |||||||||||||||||||||||||||||
Sbjct 2261 TCCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915892066337309
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |