Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq224 122 6e-23
seq2223 111 1e-19
seq1001 104 2e-17
>seq224
Length=177688
Score = 122 bits (134), Expect = 6e-23
Identities = 144/193 (75%), Gaps = 8/193 (4%)
Strand=Plus/Plus
Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840
|||| | |||| || ||||| ||||| || | |||| |||| |||| |||||||||
Sbjct 19034 GTGCACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCA 19093
Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900
||||||||||| || |||||||| | || | ||||||||||| | || || |||
Sbjct 19094 GCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTG 19153
Query 34901 ACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956
|| || ||||||| || || |||||| |||| ||| |||||||| ||||||||
Sbjct 19154 AC--AT--TATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 19209
Query 34957 GGTCTTTACAAAG 34969
|||||| || |||
Sbjct 19210 GGTCTTGACGAAG 19222
>seq2223
Length=225719
Score = 111 bits (122), Expect = 1e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | |||| ||||||||| ||||| |||||||| || |||| ||||
Sbjct 207981 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCC 207922
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||||||||||| || |||||||| | || | |||||||||||
Sbjct 207921 TCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 207863
>seq1001
Length=158095
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| || | | | || | ||
Sbjct 24804 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCC 24863
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || ||||||||| | || | |||||||||||
Sbjct 24864 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 24923
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | || | || | ||| || || | ||| || |||
Sbjct 24924 TGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 24983
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || ||||| |||||
Sbjct 24984 TTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||||||||| ||||| || || |||| ||||
Sbjct 25032 AGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCC 25091
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| |||||||| || || || ||||| || | || | || ||||||||
Sbjct 25092 TCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTC 25150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325679577991889
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |