Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2641 95.1 9e-14 >seq2641 Length=38183 Score = 95.1 bits (104), Expect = 9e-14 Identities = 192/283 (68%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || ||||| || || || ||||| | ||| | ||||| || | | ||| Sbjct 32057 ACGAGACGGTTGTCAAAGTCCTCTCCACCCAAATGAGTGTCTCCTGCAGTCGACTTCACT 32116 Query 282242 TGGAAAAGTCCATCTTCAA--GAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299 | ||| | || || || | | || || || |||||| || || ||||||| || Sbjct 32117 TCGAAGATGCCCTCCTCGATTGTGAGCAATGA--AACATCGAAAGTGCCGCCACCCAAAT 32174 Query 282300 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 282359 | ||||| || || || || || || ||||||||||| || |||| |||| Sbjct 32175 CGAAAATGAGGACGTTGCGCTCGCCCTCGGTCTTCTTATCAAGACCGTAGGCAATGGCAG 32234 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 | || ||||| || || || || | | || || || || ||||| || ||||| | Sbjct 32235 CTGCGGTTGGCTCGTTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCATCCT 32294 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 | || ||||||| || || ||||| || ||||| |||||||| Sbjct 32295 TGGTTGCTTGTCGCTGCGAGTCGTTGAAGTATGCCGGAACAGT 32337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740466861976806