Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq2726 91.5 2e-13 >seq2726 Length=34035 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 21746 ATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGGGAT 21804 ||||| |||| || ||||||||| ||| || || || | ||||||| || ||| || Sbjct 18333 ATACCTCAAATTGGTGACAAGTTCGCTTCTCGTCACGGAC-AGAAAGGTACGATCGGTAT 18391 Query 21805 GATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCATCAT 21864 | ||| |||||| ||||||| |||||| | ||| |||| || ||||||||||| Sbjct 18392 CACCTACCGACAAGAAGACATGCCGTTCACAGCCGATGGCCTGACGCCAGACATCATCAT 18451 Query 21865 CAACCCCAACTGCATTCCCTCCAGAATGACCATT 21898 |||||| || |||||| ||| | ||||| ||| Sbjct 18452 CAACCCACACGCCATTCCGTCCCGTATGACAATT 18485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521523884145080